Gene : Lsat_1_v5_gn_4_146300 L. sativa V8
Defline:  (1 of 2) K11367 - chromodomain-helicase-DNA-binding protein 1 [EC:3.6.4.12] (CHD1) Genomic Order:  4111
Name:  ? Lsat_1_v5_gn_4_146300 Secondary Identifier:  ? PAC:38931937
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_146300 0.5kb upstream 0.5kb upstream 10188   true Lsat_1_v8_lg_4: 287268201-287278388 Lactuca sativa
Lsat_1_v5_gn_4_146300 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 287268201-287268700 Lactuca sativa
Lsat_1_v5_gn_4_146300 0.5kb downstream 0.5kb downstream 10188   true Lsat_1_v8_lg_4: 287268701-287278888 Lactuca sativa
Lsat_1_v5_gn_4_146300 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 287278389-287278888 Lactuca sativa
Lsat_1_v5_gn_4_146300 1.0kb upstream 1.0kb upstream 10688   true Lsat_1_v8_lg_4: 287267701-287278388 Lactuca sativa
Lsat_1_v5_gn_4_146300 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 287267701-287268700 Lactuca sativa
Lsat_1_v5_gn_4_146300 1.0kb downstream 1.0kb downstream 10688   true Lsat_1_v8_lg_4: 287268701-287279388 Lactuca sativa
Lsat_1_v5_gn_4_146300 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 287278389-287279388 Lactuca sativa
Lsat_1_v5_gn_4_146300 2.0kb upstream 2.0kb upstream 11688   true Lsat_1_v8_lg_4: 287266701-287278388 Lactuca sativa
Lsat_1_v5_gn_4_146300 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 287266701-287268700 Lactuca sativa
Lsat_1_v5_gn_4_146300 2.0kb downstream 2.0kb downstream 11688   true Lsat_1_v8_lg_4: 287268701-287280388 Lactuca sativa
Lsat_1_v5_gn_4_146300 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 287278389-287280388 Lactuca sativa
Lsat_1_v5_gn_4_146300 5.0kb upstream 5.0kb upstream 14688   true Lsat_1_v8_lg_4: 287263701-287278388 Lactuca sativa
Lsat_1_v5_gn_4_146300 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 287263701-287268700 Lactuca sativa
Lsat_1_v5_gn_4_146300 5.0kb downstream 5.0kb downstream 14688   true Lsat_1_v8_lg_4: 287268701-287283388 Lactuca sativa
Lsat_1_v5_gn_4_146300 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 287278389-287283388 Lactuca sativa
Lsat_1_v5_gn_4_146300 10.0kb upstream 10.0kb upstream 19688   true Lsat_1_v8_lg_4: 287258701-287278388 Lactuca sativa
Lsat_1_v5_gn_4_146300 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 287258701-287268700 Lactuca sativa
Lsat_1_v5_gn_4_146300 10.0kb downstream 10.0kb downstream 19688   true Lsat_1_v8_lg_4: 287268701-287288388 Lactuca sativa
Lsat_1_v5_gn_4_146300 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 287278389-287288388 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469318 5263 Asterids View MSA
123752228 5271 Pentapetalae View MSA
122786822 5272 Eudicot View MSA
122051163 5273 Angiosperm View MSA
121347605 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain