Gene : Lsat_1_v5_gn_4_148880 L. sativa V8
Defline:  (1 of 5) PTHR11817:SF26 - PLASTIDIAL PYRUVATE KINASE 3, CHLOROPLASTIC Genomic Order:  4175
Name:  ? Lsat_1_v5_gn_4_148880 Secondary Identifier:  ? PAC:38931614
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ANAEROFRUCAT-PWY Lactuca sativa pathologic  
Lsativa ANAGLYCOLYSIS-PWY Lactuca sativa pathologic  
Lsativa PWY-1042 Lactuca sativa pathologic  
Lsativa PWY-5464 Lactuca sativa pathologic  
Lsativa PWY-5723 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_148880 0.5kb upstream 0.5kb upstream 3368   true Lsat_1_v8_lg_4: 293233358-293236725 Lactuca sativa
Lsat_1_v5_gn_4_148880 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 293233358-293233857 Lactuca sativa
Lsat_1_v5_gn_4_148880 0.5kb downstream 0.5kb downstream 3368   true Lsat_1_v8_lg_4: 293233858-293237225 Lactuca sativa
Lsat_1_v5_gn_4_148880 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 293236726-293237225 Lactuca sativa
Lsat_1_v5_gn_4_148880 1.0kb upstream 1.0kb upstream 3868   true Lsat_1_v8_lg_4: 293232858-293236725 Lactuca sativa
Lsat_1_v5_gn_4_148880 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 293232858-293233857 Lactuca sativa
Lsat_1_v5_gn_4_148880 1.0kb downstream 1.0kb downstream 3868   true Lsat_1_v8_lg_4: 293233858-293237725 Lactuca sativa
Lsat_1_v5_gn_4_148880 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 293236726-293237725 Lactuca sativa
Lsat_1_v5_gn_4_148880 2.0kb upstream 2.0kb upstream 4868   true Lsat_1_v8_lg_4: 293231858-293236725 Lactuca sativa
Lsat_1_v5_gn_4_148880 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 293231858-293233857 Lactuca sativa
Lsat_1_v5_gn_4_148880 2.0kb downstream 2.0kb downstream 4868   true Lsat_1_v8_lg_4: 293233858-293238725 Lactuca sativa
Lsat_1_v5_gn_4_148880 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 293236726-293238725 Lactuca sativa
Lsat_1_v5_gn_4_148880 5.0kb upstream 5.0kb upstream 7868   true Lsat_1_v8_lg_4: 293228858-293236725 Lactuca sativa
Lsat_1_v5_gn_4_148880 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 293228858-293233857 Lactuca sativa
Lsat_1_v5_gn_4_148880 5.0kb downstream 5.0kb downstream 7868   true Lsat_1_v8_lg_4: 293233858-293241725 Lactuca sativa
Lsat_1_v5_gn_4_148880 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 293236726-293241725 Lactuca sativa
Lsat_1_v5_gn_4_148880 10.0kb upstream 10.0kb upstream 12868   true Lsat_1_v8_lg_4: 293223858-293236725 Lactuca sativa
Lsat_1_v5_gn_4_148880 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 293223858-293233857 Lactuca sativa
Lsat_1_v5_gn_4_148880 10.0kb downstream 10.0kb downstream 12868   true Lsat_1_v8_lg_4: 293233858-293246725 Lactuca sativa
Lsat_1_v5_gn_4_148880 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 293236726-293246725 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780529 5273 Angiosperm View MSA
121444202 5263 Asterids Singleton cluster - no MSA
123746594 5271 Pentapetalae View MSA
122771984 5272 Eudicot View MSA
121052138 5274 Embryophyte View MSA
123092194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain