Gene : Lsat_1_v5_gn_4_148240 L. sativa V8
Defline:  (1 of 2) 2.7.7.3 - Pantetheine-phosphate adenylyltransferase / PPAT Genomic Order:  4245
Name:  ? Lsat_1_v5_gn_4_148240 Secondary Identifier:  ? PAC:38929674
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa COA-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_148240 0.5kb upstream 0.5kb upstream 3681   true Lsat_1_v8_lg_4: 298271548-298275228 Lactuca sativa
Lsat_1_v5_gn_4_148240 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 298271548-298272047 Lactuca sativa
Lsat_1_v5_gn_4_148240 0.5kb downstream 0.5kb downstream 3681   true Lsat_1_v8_lg_4: 298272048-298275728 Lactuca sativa
Lsat_1_v5_gn_4_148240 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 298275229-298275728 Lactuca sativa
Lsat_1_v5_gn_4_148240 1.0kb upstream 1.0kb upstream 4181   true Lsat_1_v8_lg_4: 298271048-298275228 Lactuca sativa
Lsat_1_v5_gn_4_148240 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 298271048-298272047 Lactuca sativa
Lsat_1_v5_gn_4_148240 1.0kb downstream 1.0kb downstream 4181   true Lsat_1_v8_lg_4: 298272048-298276228 Lactuca sativa
Lsat_1_v5_gn_4_148240 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 298275229-298276228 Lactuca sativa
Lsat_1_v5_gn_4_148240 2.0kb upstream 2.0kb upstream 5181   true Lsat_1_v8_lg_4: 298270048-298275228 Lactuca sativa
Lsat_1_v5_gn_4_148240 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 298270048-298272047 Lactuca sativa
Lsat_1_v5_gn_4_148240 2.0kb downstream 2.0kb downstream 5181   true Lsat_1_v8_lg_4: 298272048-298277228 Lactuca sativa
Lsat_1_v5_gn_4_148240 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 298275229-298277228 Lactuca sativa
Lsat_1_v5_gn_4_148240 5.0kb upstream 5.0kb upstream 8181   true Lsat_1_v8_lg_4: 298267048-298275228 Lactuca sativa
Lsat_1_v5_gn_4_148240 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 298267048-298272047 Lactuca sativa
Lsat_1_v5_gn_4_148240 5.0kb downstream 5.0kb downstream 8181   true Lsat_1_v8_lg_4: 298272048-298280228 Lactuca sativa
Lsat_1_v5_gn_4_148240 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 298275229-298280228 Lactuca sativa
Lsat_1_v5_gn_4_148240 10.0kb upstream 10.0kb upstream 13181   true Lsat_1_v8_lg_4: 298262048-298275228 Lactuca sativa
Lsat_1_v5_gn_4_148240 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 298262048-298272047 Lactuca sativa
Lsat_1_v5_gn_4_148240 10.0kb downstream 10.0kb downstream 13181   true Lsat_1_v8_lg_4: 298272048-298285228 Lactuca sativa
Lsat_1_v5_gn_4_148240 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 298275229-298285228 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474226 5263 Asterids View MSA
123751907 5271 Pentapetalae View MSA
122795383 5272 Eudicot View MSA
122050871 5273 Angiosperm View MSA
121345308 5274 Embryophyte View MSA
123425957 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain