Gene : Lsat_1_v5_gn_4_150721 L. sativa V8
Defline:  (1 of 1) K00234 - succinate dehydrogenase (ubiquinone) flavoprotein subunit (SDHA, SDH1) Genomic Order:  4273
Name:  ? Lsat_1_v5_gn_4_150721 Secondary Identifier:  ? PAC:38928410
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-3781 Lactuca sativa pathologic  
Lsativa PWY-4302 Lactuca sativa pathologic  
Lsativa PWY-5464 Lactuca sativa pathologic  
Lsativa PWY-561 Lactuca sativa pathologic  
Lsativa PWY-5690 Lactuca sativa pathologic  
Lsativa PWY-7279 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_150721 0.5kb upstream 0.5kb upstream 4905   true Lsat_1_v8_lg_4: 300823122-300828026 Lactuca sativa
Lsat_1_v5_gn_4_150721 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 300827527-300828026 Lactuca sativa
Lsat_1_v5_gn_4_150721 0.5kb downstream 0.5kb downstream 4905   true Lsat_1_v8_lg_4: 300822622-300827526 Lactuca sativa
Lsat_1_v5_gn_4_150721 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 300822622-300823121 Lactuca sativa
Lsat_1_v5_gn_4_150721 1.0kb upstream 1.0kb upstream 5405   true Lsat_1_v8_lg_4: 300823122-300828526 Lactuca sativa
Lsat_1_v5_gn_4_150721 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 300827527-300828526 Lactuca sativa
Lsat_1_v5_gn_4_150721 1.0kb downstream 1.0kb downstream 5405   true Lsat_1_v8_lg_4: 300822122-300827526 Lactuca sativa
Lsat_1_v5_gn_4_150721 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 300822122-300823121 Lactuca sativa
Lsat_1_v5_gn_4_150721 2.0kb upstream 2.0kb upstream 6405   true Lsat_1_v8_lg_4: 300823122-300829526 Lactuca sativa
Lsat_1_v5_gn_4_150721 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 300827527-300829526 Lactuca sativa
Lsat_1_v5_gn_4_150721 2.0kb downstream 2.0kb downstream 6405   true Lsat_1_v8_lg_4: 300821122-300827526 Lactuca sativa
Lsat_1_v5_gn_4_150721 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 300821122-300823121 Lactuca sativa
Lsat_1_v5_gn_4_150721 5.0kb upstream 5.0kb upstream 9405   true Lsat_1_v8_lg_4: 300823122-300832526 Lactuca sativa
Lsat_1_v5_gn_4_150721 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 300827527-300832526 Lactuca sativa
Lsat_1_v5_gn_4_150721 5.0kb downstream 5.0kb downstream 9405   true Lsat_1_v8_lg_4: 300818122-300827526 Lactuca sativa
Lsat_1_v5_gn_4_150721 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 300818122-300823121 Lactuca sativa
Lsat_1_v5_gn_4_150721 10.0kb upstream 10.0kb upstream 14405   true Lsat_1_v8_lg_4: 300823122-300837526 Lactuca sativa
Lsat_1_v5_gn_4_150721 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 300827527-300837526 Lactuca sativa
Lsat_1_v5_gn_4_150721 10.0kb downstream 10.0kb downstream 14405   true Lsat_1_v8_lg_4: 300813122-300827526 Lactuca sativa
Lsat_1_v5_gn_4_150721 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 300813122-300823121 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472778 5263 Asterids View MSA
123753034 5271 Pentapetalae View MSA
122790960 5272 Eudicot View MSA
122043363 5273 Angiosperm View MSA
121346345 5274 Embryophyte View MSA
123424943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain