Gene : Lsat_1_v5_gn_4_150881 L. sativa V8
Defline:  (1 of 2) PTHR12069 - DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5 Genomic Order:  4281
Name:  ? Lsat_1_v5_gn_4_150881 Secondary Identifier:  ? PAC:38933133
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_150881 0.5kb upstream 0.5kb upstream 3693   true Lsat_1_v8_lg_4: 301129120-301132812 Lactuca sativa
Lsat_1_v5_gn_4_150881 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 301132313-301132812 Lactuca sativa
Lsat_1_v5_gn_4_150881 0.5kb downstream 0.5kb downstream 3693   true Lsat_1_v8_lg_4: 301128620-301132312 Lactuca sativa
Lsat_1_v5_gn_4_150881 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 301128620-301129119 Lactuca sativa
Lsat_1_v5_gn_4_150881 1.0kb upstream 1.0kb upstream 4193   true Lsat_1_v8_lg_4: 301129120-301133312 Lactuca sativa
Lsat_1_v5_gn_4_150881 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 301132313-301133312 Lactuca sativa
Lsat_1_v5_gn_4_150881 1.0kb downstream 1.0kb downstream 4193   true Lsat_1_v8_lg_4: 301128120-301132312 Lactuca sativa
Lsat_1_v5_gn_4_150881 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 301128120-301129119 Lactuca sativa
Lsat_1_v5_gn_4_150881 2.0kb upstream 2.0kb upstream 5193   true Lsat_1_v8_lg_4: 301129120-301134312 Lactuca sativa
Lsat_1_v5_gn_4_150881 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 301132313-301134312 Lactuca sativa
Lsat_1_v5_gn_4_150881 2.0kb downstream 2.0kb downstream 5193   true Lsat_1_v8_lg_4: 301127120-301132312 Lactuca sativa
Lsat_1_v5_gn_4_150881 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 301127120-301129119 Lactuca sativa
Lsat_1_v5_gn_4_150881 5.0kb upstream 5.0kb upstream 8193   true Lsat_1_v8_lg_4: 301129120-301137312 Lactuca sativa
Lsat_1_v5_gn_4_150881 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 301132313-301137312 Lactuca sativa
Lsat_1_v5_gn_4_150881 5.0kb downstream 5.0kb downstream 8193   true Lsat_1_v8_lg_4: 301124120-301132312 Lactuca sativa
Lsat_1_v5_gn_4_150881 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 301124120-301129119 Lactuca sativa
Lsat_1_v5_gn_4_150881 10.0kb upstream 10.0kb upstream 13193   true Lsat_1_v8_lg_4: 301129120-301142312 Lactuca sativa
Lsat_1_v5_gn_4_150881 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 301132313-301142312 Lactuca sativa
Lsat_1_v5_gn_4_150881 10.0kb downstream 10.0kb downstream 13193   true Lsat_1_v8_lg_4: 301119120-301132312 Lactuca sativa
Lsat_1_v5_gn_4_150881 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 301119120-301129119 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026664 5273 Angiosperm View MSA
121444479 5263 Asterids Singleton cluster - no MSA
123758194 5271 Pentapetalae View MSA
122779175 5272 Eudicot View MSA
123429138 5275 Viridiplantae View MSA
121296462 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain