Gene : Lsat_1_v5_gn_4_153121 L. sativa V8

Defline:  (1 of 1) 5.3.99.6 - Allene-oxide cyclase Genomic Order:  4303
Name:  ? Lsat_1_v5_gn_4_153121 Secondary Identifier:  ? PAC:38933860

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-735 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_153121 0.5kb upstream 0.5kb upstream 1800   true Lsat_1_v8_lg_4: 303671961-303673760 Lactuca sativa
Lsat_1_v5_gn_4_153121 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 303671961-303672460 Lactuca sativa
Lsat_1_v5_gn_4_153121 0.5kb downstream 0.5kb downstream 1800   true Lsat_1_v8_lg_4: 303672461-303674260 Lactuca sativa
Lsat_1_v5_gn_4_153121 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 303673761-303674260 Lactuca sativa
Lsat_1_v5_gn_4_153121 1.0kb upstream 1.0kb upstream 2300   true Lsat_1_v8_lg_4: 303671461-303673760 Lactuca sativa
Lsat_1_v5_gn_4_153121 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 303671461-303672460 Lactuca sativa
Lsat_1_v5_gn_4_153121 1.0kb downstream 1.0kb downstream 2300   true Lsat_1_v8_lg_4: 303672461-303674760 Lactuca sativa
Lsat_1_v5_gn_4_153121 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 303673761-303674760 Lactuca sativa
Lsat_1_v5_gn_4_153121 2.0kb upstream 2.0kb upstream 3300   true Lsat_1_v8_lg_4: 303670461-303673760 Lactuca sativa
Lsat_1_v5_gn_4_153121 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 303670461-303672460 Lactuca sativa
Lsat_1_v5_gn_4_153121 2.0kb downstream 2.0kb downstream 3300   true Lsat_1_v8_lg_4: 303672461-303675760 Lactuca sativa
Lsat_1_v5_gn_4_153121 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 303673761-303675760 Lactuca sativa
Lsat_1_v5_gn_4_153121 5.0kb upstream 5.0kb upstream 6300   true Lsat_1_v8_lg_4: 303667461-303673760 Lactuca sativa
Lsat_1_v5_gn_4_153121 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 303667461-303672460 Lactuca sativa
Lsat_1_v5_gn_4_153121 5.0kb downstream 5.0kb downstream 6300   true Lsat_1_v8_lg_4: 303672461-303678760 Lactuca sativa
Lsat_1_v5_gn_4_153121 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 303673761-303678760 Lactuca sativa
Lsat_1_v5_gn_4_153121 10.0kb upstream 10.0kb upstream 11300   true Lsat_1_v8_lg_4: 303662461-303673760 Lactuca sativa
Lsat_1_v5_gn_4_153121 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 303662461-303672460 Lactuca sativa
Lsat_1_v5_gn_4_153121 10.0kb downstream 10.0kb downstream 11300   true Lsat_1_v8_lg_4: 303672461-303683760 Lactuca sativa
Lsat_1_v5_gn_4_153121 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 303673761-303683760 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480389 5263 Asterids View MSA
123739753 5271 Pentapetalae View MSA
122789032 5272 Eudicot View MSA
122045897 5273 Angiosperm View MSA
121350459 5274 Embryophyte View MSA
123426138 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain