Gene : Lsat_1_v5_gn_4_154001 L. sativa V8
Defline:  (1 of 2) K01809 - mannose-6-phosphate isomerase (manA, MPI) Genomic Order:  4316
Name:  ? Lsat_1_v5_gn_4_154001 Secondary Identifier:  ? PAC:38935432
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa MANNCAT-PWY Lactuca sativa pathologic  
Lsativa PWY-3861 Lactuca sativa pathologic  
Lsativa PWY-3881 Lactuca sativa pathologic  
Lsativa PWY-5659 Lactuca sativa pathologic  
Lsativa PWY-882 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_154001 0.5kb upstream 0.5kb upstream 4379   true Lsat_1_v8_lg_4: 304982298-304986676 Lactuca sativa
Lsat_1_v5_gn_4_154001 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 304986177-304986676 Lactuca sativa
Lsat_1_v5_gn_4_154001 0.5kb downstream 0.5kb downstream 4379   true Lsat_1_v8_lg_4: 304981798-304986176 Lactuca sativa
Lsat_1_v5_gn_4_154001 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 304981798-304982297 Lactuca sativa
Lsat_1_v5_gn_4_154001 1.0kb upstream 1.0kb upstream 4879   true Lsat_1_v8_lg_4: 304982298-304987176 Lactuca sativa
Lsat_1_v5_gn_4_154001 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 304986177-304987176 Lactuca sativa
Lsat_1_v5_gn_4_154001 1.0kb downstream 1.0kb downstream 4879   true Lsat_1_v8_lg_4: 304981298-304986176 Lactuca sativa
Lsat_1_v5_gn_4_154001 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 304981298-304982297 Lactuca sativa
Lsat_1_v5_gn_4_154001 2.0kb upstream 2.0kb upstream 5879   true Lsat_1_v8_lg_4: 304982298-304988176 Lactuca sativa
Lsat_1_v5_gn_4_154001 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 304986177-304988176 Lactuca sativa
Lsat_1_v5_gn_4_154001 2.0kb downstream 2.0kb downstream 5879   true Lsat_1_v8_lg_4: 304980298-304986176 Lactuca sativa
Lsat_1_v5_gn_4_154001 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 304980298-304982297 Lactuca sativa
Lsat_1_v5_gn_4_154001 5.0kb upstream 5.0kb upstream 8879   true Lsat_1_v8_lg_4: 304982298-304991176 Lactuca sativa
Lsat_1_v5_gn_4_154001 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 304986177-304991176 Lactuca sativa
Lsat_1_v5_gn_4_154001 5.0kb downstream 5.0kb downstream 8879   true Lsat_1_v8_lg_4: 304977298-304986176 Lactuca sativa
Lsat_1_v5_gn_4_154001 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 304977298-304982297 Lactuca sativa
Lsat_1_v5_gn_4_154001 10.0kb upstream 10.0kb upstream 13879   true Lsat_1_v8_lg_4: 304982298-304996176 Lactuca sativa
Lsat_1_v5_gn_4_154001 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 304986177-304996176 Lactuca sativa
Lsat_1_v5_gn_4_154001 10.0kb downstream 10.0kb downstream 13879   true Lsat_1_v8_lg_4: 304972298-304986176 Lactuca sativa
Lsat_1_v5_gn_4_154001 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 304972298-304982297 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478326 5263 Asterids View MSA
123747047 5271 Pentapetalae View MSA
122796882 5272 Eudicot View MSA
122046941 5273 Angiosperm View MSA
121350841 5274 Embryophyte View MSA
123423837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain