Gene : Lsat_1_v5_gn_4_15340 L. sativa V8
Defline:  (1 of 200) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  424
Name:  ? Lsat_1_v5_gn_4_15340 Secondary Identifier:  ? PAC:38934320
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_15340 0.5kb upstream 0.5kb upstream 2189   true Lsat_1_v8_lg_4: 22092634-22094822 Lactuca sativa
Lsat_1_v5_gn_4_15340 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 22092634-22093133 Lactuca sativa
Lsat_1_v5_gn_4_15340 0.5kb downstream 0.5kb downstream 2189   true Lsat_1_v8_lg_4: 22093134-22095322 Lactuca sativa
Lsat_1_v5_gn_4_15340 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 22094823-22095322 Lactuca sativa
Lsat_1_v5_gn_4_15340 1.0kb upstream 1.0kb upstream 2689   true Lsat_1_v8_lg_4: 22092134-22094822 Lactuca sativa
Lsat_1_v5_gn_4_15340 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 22092134-22093133 Lactuca sativa
Lsat_1_v5_gn_4_15340 1.0kb downstream 1.0kb downstream 2689   true Lsat_1_v8_lg_4: 22093134-22095822 Lactuca sativa
Lsat_1_v5_gn_4_15340 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 22094823-22095822 Lactuca sativa
Lsat_1_v5_gn_4_15340 2.0kb upstream 2.0kb upstream 3689   true Lsat_1_v8_lg_4: 22091134-22094822 Lactuca sativa
Lsat_1_v5_gn_4_15340 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 22091134-22093133 Lactuca sativa
Lsat_1_v5_gn_4_15340 2.0kb downstream 2.0kb downstream 3689   true Lsat_1_v8_lg_4: 22093134-22096822 Lactuca sativa
Lsat_1_v5_gn_4_15340 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 22094823-22096822 Lactuca sativa
Lsat_1_v5_gn_4_15340 5.0kb upstream 5.0kb upstream 6689   true Lsat_1_v8_lg_4: 22088134-22094822 Lactuca sativa
Lsat_1_v5_gn_4_15340 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 22088134-22093133 Lactuca sativa
Lsat_1_v5_gn_4_15340 5.0kb downstream 5.0kb downstream 6689   true Lsat_1_v8_lg_4: 22093134-22099822 Lactuca sativa
Lsat_1_v5_gn_4_15340 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 22094823-22099822 Lactuca sativa
Lsat_1_v5_gn_4_15340 10.0kb upstream 10.0kb upstream 11689   true Lsat_1_v8_lg_4: 22083134-22094822 Lactuca sativa
Lsat_1_v5_gn_4_15340 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 22083134-22093133 Lactuca sativa
Lsat_1_v5_gn_4_15340 10.0kb downstream 10.0kb downstream 11689   true Lsat_1_v8_lg_4: 22093134-22104822 Lactuca sativa
Lsat_1_v5_gn_4_15340 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 22094823-22104822 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470669 5263 Asterids View MSA
123738652 5271 Pentapetalae View MSA
122793005 5272 Eudicot View MSA
122045173 5273 Angiosperm View MSA
121310410 5274 Embryophyte View MSA
123347900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain