Gene : Lsat_1_v5_gn_4_159841 L. sativa V8
Defline:  (1 of 8) PF05097 - Protein of unknown function (DUF688) (DUF688) Genomic Order:  4486
Name:  ? Lsat_1_v5_gn_4_159841 Secondary Identifier:  ? PAC:38933734
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_159841 0.5kb upstream 0.5kb upstream 1210   true Lsat_1_v8_lg_4: 320051861-320053070 Lactuca sativa
Lsat_1_v5_gn_4_159841 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 320051861-320052360 Lactuca sativa
Lsat_1_v5_gn_4_159841 0.5kb downstream 0.5kb downstream 1210   true Lsat_1_v8_lg_4: 320052361-320053570 Lactuca sativa
Lsat_1_v5_gn_4_159841 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 320053071-320053570 Lactuca sativa
Lsat_1_v5_gn_4_159841 1.0kb upstream 1.0kb upstream 1710   true Lsat_1_v8_lg_4: 320051361-320053070 Lactuca sativa
Lsat_1_v5_gn_4_159841 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 320051361-320052360 Lactuca sativa
Lsat_1_v5_gn_4_159841 1.0kb downstream 1.0kb downstream 1710   true Lsat_1_v8_lg_4: 320052361-320054070 Lactuca sativa
Lsat_1_v5_gn_4_159841 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 320053071-320054070 Lactuca sativa
Lsat_1_v5_gn_4_159841 2.0kb upstream 2.0kb upstream 2710   true Lsat_1_v8_lg_4: 320050361-320053070 Lactuca sativa
Lsat_1_v5_gn_4_159841 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 320050361-320052360 Lactuca sativa
Lsat_1_v5_gn_4_159841 2.0kb downstream 2.0kb downstream 2710   true Lsat_1_v8_lg_4: 320052361-320055070 Lactuca sativa
Lsat_1_v5_gn_4_159841 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 320053071-320055070 Lactuca sativa
Lsat_1_v5_gn_4_159841 5.0kb upstream 5.0kb upstream 5710   true Lsat_1_v8_lg_4: 320047361-320053070 Lactuca sativa
Lsat_1_v5_gn_4_159841 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 320047361-320052360 Lactuca sativa
Lsat_1_v5_gn_4_159841 5.0kb downstream 5.0kb downstream 5710   true Lsat_1_v8_lg_4: 320052361-320058070 Lactuca sativa
Lsat_1_v5_gn_4_159841 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 320053071-320058070 Lactuca sativa
Lsat_1_v5_gn_4_159841 10.0kb upstream 10.0kb upstream 10710   true Lsat_1_v8_lg_4: 320042361-320053070 Lactuca sativa
Lsat_1_v5_gn_4_159841 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 320042361-320052360 Lactuca sativa
Lsat_1_v5_gn_4_159841 10.0kb downstream 10.0kb downstream 10710   true Lsat_1_v8_lg_4: 320052361-320063070 Lactuca sativa
Lsat_1_v5_gn_4_159841 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 320053071-320063070 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467708 5263 Asterids View MSA
123748040 5271 Pentapetalae View MSA
122795474 5272 Eudicot View MSA
122049581 5273 Angiosperm View MSA
121311486 5274 Embryophyte View MSA
123348778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain