Gene : Lsat_1_v5_gn_4_163180 L. sativa V8
Defline:  (1 of 5) K12347 - natural resistance-associated macrophage protein (SLC11A, NRAMP) Genomic Order:  4571
Name:  ? Lsat_1_v5_gn_4_163180 Secondary Identifier:  ? PAC:38934806
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_163180 0.5kb upstream 0.5kb upstream 3456   true Lsat_1_v8_lg_4: 326363359-326366814 Lactuca sativa
Lsat_1_v5_gn_4_163180 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 326366315-326366814 Lactuca sativa
Lsat_1_v5_gn_4_163180 0.5kb downstream 0.5kb downstream 3456   true Lsat_1_v8_lg_4: 326362859-326366314 Lactuca sativa
Lsat_1_v5_gn_4_163180 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 326362859-326363358 Lactuca sativa
Lsat_1_v5_gn_4_163180 1.0kb upstream 1.0kb upstream 3956   true Lsat_1_v8_lg_4: 326363359-326367314 Lactuca sativa
Lsat_1_v5_gn_4_163180 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 326366315-326367314 Lactuca sativa
Lsat_1_v5_gn_4_163180 1.0kb downstream 1.0kb downstream 3956   true Lsat_1_v8_lg_4: 326362359-326366314 Lactuca sativa
Lsat_1_v5_gn_4_163180 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 326362359-326363358 Lactuca sativa
Lsat_1_v5_gn_4_163180 2.0kb upstream 2.0kb upstream 4956   true Lsat_1_v8_lg_4: 326363359-326368314 Lactuca sativa
Lsat_1_v5_gn_4_163180 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 326366315-326368314 Lactuca sativa
Lsat_1_v5_gn_4_163180 2.0kb downstream 2.0kb downstream 4956   true Lsat_1_v8_lg_4: 326361359-326366314 Lactuca sativa
Lsat_1_v5_gn_4_163180 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 326361359-326363358 Lactuca sativa
Lsat_1_v5_gn_4_163180 5.0kb upstream 5.0kb upstream 7956   true Lsat_1_v8_lg_4: 326363359-326371314 Lactuca sativa
Lsat_1_v5_gn_4_163180 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 326366315-326371314 Lactuca sativa
Lsat_1_v5_gn_4_163180 5.0kb downstream 5.0kb downstream 7956   true Lsat_1_v8_lg_4: 326358359-326366314 Lactuca sativa
Lsat_1_v5_gn_4_163180 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 326358359-326363358 Lactuca sativa
Lsat_1_v5_gn_4_163180 10.0kb upstream 10.0kb upstream 12956   true Lsat_1_v8_lg_4: 326363359-326376314 Lactuca sativa
Lsat_1_v5_gn_4_163180 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 326366315-326376314 Lactuca sativa
Lsat_1_v5_gn_4_163180 10.0kb downstream 10.0kb downstream 12956   true Lsat_1_v8_lg_4: 326353359-326366314 Lactuca sativa
Lsat_1_v5_gn_4_163180 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 326353359-326363358 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476693 5263 Asterids View MSA
123745753 5271 Pentapetalae View MSA
122790542 5272 Eudicot View MSA
122045270 5273 Angiosperm View MSA
121347104 5274 Embryophyte View MSA
123426907 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain