Gene : Lsat_1_v5_gn_4_165160 L. sativa V8
Defline:  (1 of 1) K13717 - OTU domain-containing protein 3 [EC:3.4.19.12] (OTUD3) Genomic Order:  4622
Name:  ? Lsat_1_v5_gn_4_165160 Secondary Identifier:  ? PAC:38934419
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_165160 0.5kb upstream 0.5kb upstream 5154   true Lsat_1_v8_lg_4: 333241039-333246192 Lactuca sativa
Lsat_1_v5_gn_4_165160 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 333245693-333246192 Lactuca sativa
Lsat_1_v5_gn_4_165160 0.5kb downstream 0.5kb downstream 5154   true Lsat_1_v8_lg_4: 333240539-333245692 Lactuca sativa
Lsat_1_v5_gn_4_165160 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 333240539-333241038 Lactuca sativa
Lsat_1_v5_gn_4_165160 1.0kb upstream 1.0kb upstream 5654   true Lsat_1_v8_lg_4: 333241039-333246692 Lactuca sativa
Lsat_1_v5_gn_4_165160 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 333245693-333246692 Lactuca sativa
Lsat_1_v5_gn_4_165160 1.0kb downstream 1.0kb downstream 5654   true Lsat_1_v8_lg_4: 333240039-333245692 Lactuca sativa
Lsat_1_v5_gn_4_165160 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 333240039-333241038 Lactuca sativa
Lsat_1_v5_gn_4_165160 2.0kb upstream 2.0kb upstream 6654   true Lsat_1_v8_lg_4: 333241039-333247692 Lactuca sativa
Lsat_1_v5_gn_4_165160 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 333245693-333247692 Lactuca sativa
Lsat_1_v5_gn_4_165160 2.0kb downstream 2.0kb downstream 6654   true Lsat_1_v8_lg_4: 333239039-333245692 Lactuca sativa
Lsat_1_v5_gn_4_165160 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 333239039-333241038 Lactuca sativa
Lsat_1_v5_gn_4_165160 5.0kb upstream 5.0kb upstream 9654   true Lsat_1_v8_lg_4: 333241039-333250692 Lactuca sativa
Lsat_1_v5_gn_4_165160 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 333245693-333250692 Lactuca sativa
Lsat_1_v5_gn_4_165160 5.0kb downstream 5.0kb downstream 9654   true Lsat_1_v8_lg_4: 333236039-333245692 Lactuca sativa
Lsat_1_v5_gn_4_165160 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 333236039-333241038 Lactuca sativa
Lsat_1_v5_gn_4_165160 10.0kb upstream 10.0kb upstream 14654   true Lsat_1_v8_lg_4: 333241039-333255692 Lactuca sativa
Lsat_1_v5_gn_4_165160 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 333245693-333255692 Lactuca sativa
Lsat_1_v5_gn_4_165160 10.0kb downstream 10.0kb downstream 14654   true Lsat_1_v8_lg_4: 333231039-333245692 Lactuca sativa
Lsat_1_v5_gn_4_165160 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 333231039-333241038 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467120 5263 Asterids View MSA
123745546 5271 Pentapetalae View MSA
122787389 5272 Eudicot View MSA
122041608 5273 Angiosperm View MSA
121347051 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain