Gene : Lsat_1_v5_gn_4_164080 L. sativa V8
Defline:  (1 of 1) PTHR24093//PTHR24093:SF272 - FAMILY NOT NAMED // CADMIUM/ZINC-TRANSPORTING ATPASE HMA1, CHLOROPLASTIC-RELATED Genomic Order:  4591
Name:  ? Lsat_1_v5_gn_4_164080 Secondary Identifier:  ? PAC:38933041
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_164080 0.5kb upstream 0.5kb upstream 7791   true Lsat_1_v8_lg_4: 328336064-328343854 Lactuca sativa
Lsat_1_v5_gn_4_164080 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 328336064-328336563 Lactuca sativa
Lsat_1_v5_gn_4_164080 0.5kb downstream 0.5kb downstream 7791   true Lsat_1_v8_lg_4: 328336564-328344354 Lactuca sativa
Lsat_1_v5_gn_4_164080 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 328343855-328344354 Lactuca sativa
Lsat_1_v5_gn_4_164080 1.0kb upstream 1.0kb upstream 8291   true Lsat_1_v8_lg_4: 328335564-328343854 Lactuca sativa
Lsat_1_v5_gn_4_164080 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 328335564-328336563 Lactuca sativa
Lsat_1_v5_gn_4_164080 1.0kb downstream 1.0kb downstream 8291   true Lsat_1_v8_lg_4: 328336564-328344854 Lactuca sativa
Lsat_1_v5_gn_4_164080 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 328343855-328344854 Lactuca sativa
Lsat_1_v5_gn_4_164080 2.0kb upstream 2.0kb upstream 9291   true Lsat_1_v8_lg_4: 328334564-328343854 Lactuca sativa
Lsat_1_v5_gn_4_164080 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 328334564-328336563 Lactuca sativa
Lsat_1_v5_gn_4_164080 2.0kb downstream 2.0kb downstream 9291   true Lsat_1_v8_lg_4: 328336564-328345854 Lactuca sativa
Lsat_1_v5_gn_4_164080 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 328343855-328345854 Lactuca sativa
Lsat_1_v5_gn_4_164080 5.0kb upstream 5.0kb upstream 12291   true Lsat_1_v8_lg_4: 328331564-328343854 Lactuca sativa
Lsat_1_v5_gn_4_164080 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 328331564-328336563 Lactuca sativa
Lsat_1_v5_gn_4_164080 5.0kb downstream 5.0kb downstream 12291   true Lsat_1_v8_lg_4: 328336564-328348854 Lactuca sativa
Lsat_1_v5_gn_4_164080 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 328343855-328348854 Lactuca sativa
Lsat_1_v5_gn_4_164080 10.0kb upstream 10.0kb upstream 17291   true Lsat_1_v8_lg_4: 328326564-328343854 Lactuca sativa
Lsat_1_v5_gn_4_164080 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 328326564-328336563 Lactuca sativa
Lsat_1_v5_gn_4_164080 10.0kb downstream 10.0kb downstream 17291   true Lsat_1_v8_lg_4: 328336564-328353854 Lactuca sativa
Lsat_1_v5_gn_4_164080 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 328343855-328353854 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471906 5263 Asterids View MSA
123739287 5271 Pentapetalae View MSA
122793193 5272 Eudicot View MSA
122049253 5273 Angiosperm View MSA
121346683 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain