Gene : Lsat_1_v5_gn_4_164401 L. sativa V8
Defline:  (1 of 2) PTHR10896//PTHR10896:SF17 - GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE // BETA-1,4-XYLOSYLTRANSFERASE IRX14-RELATED Genomic Order:  4608
Name:  ? Lsat_1_v5_gn_4_164401 Secondary Identifier:  ? PAC:38930535
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5800 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_164401 0.5kb upstream 0.5kb upstream 4584   true Lsat_1_v8_lg_4: 331292255-331296838 Lactuca sativa
Lsat_1_v5_gn_4_164401 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 331296339-331296838 Lactuca sativa
Lsat_1_v5_gn_4_164401 0.5kb downstream 0.5kb downstream 4584   true Lsat_1_v8_lg_4: 331291755-331296338 Lactuca sativa
Lsat_1_v5_gn_4_164401 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 331291755-331292254 Lactuca sativa
Lsat_1_v5_gn_4_164401 1.0kb upstream 1.0kb upstream 5084   true Lsat_1_v8_lg_4: 331292255-331297338 Lactuca sativa
Lsat_1_v5_gn_4_164401 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 331296339-331297338 Lactuca sativa
Lsat_1_v5_gn_4_164401 1.0kb downstream 1.0kb downstream 5084   true Lsat_1_v8_lg_4: 331291255-331296338 Lactuca sativa
Lsat_1_v5_gn_4_164401 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 331291255-331292254 Lactuca sativa
Lsat_1_v5_gn_4_164401 2.0kb upstream 2.0kb upstream 6084   true Lsat_1_v8_lg_4: 331292255-331298338 Lactuca sativa
Lsat_1_v5_gn_4_164401 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 331296339-331298338 Lactuca sativa
Lsat_1_v5_gn_4_164401 2.0kb downstream 2.0kb downstream 6084   true Lsat_1_v8_lg_4: 331290255-331296338 Lactuca sativa
Lsat_1_v5_gn_4_164401 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 331290255-331292254 Lactuca sativa
Lsat_1_v5_gn_4_164401 5.0kb upstream 5.0kb upstream 9084   true Lsat_1_v8_lg_4: 331292255-331301338 Lactuca sativa
Lsat_1_v5_gn_4_164401 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 331296339-331301338 Lactuca sativa
Lsat_1_v5_gn_4_164401 5.0kb downstream 5.0kb downstream 9084   true Lsat_1_v8_lg_4: 331287255-331296338 Lactuca sativa
Lsat_1_v5_gn_4_164401 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 331287255-331292254 Lactuca sativa
Lsat_1_v5_gn_4_164401 10.0kb upstream 10.0kb upstream 14084   true Lsat_1_v8_lg_4: 331292255-331306338 Lactuca sativa
Lsat_1_v5_gn_4_164401 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 331296339-331306338 Lactuca sativa
Lsat_1_v5_gn_4_164401 10.0kb downstream 10.0kb downstream 14084   true Lsat_1_v8_lg_4: 331282255-331296338 Lactuca sativa
Lsat_1_v5_gn_4_164401 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 331282255-331292254 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041384 5273 Angiosperm View MSA
121479064 5263 Asterids View MSA
123737943 5271 Pentapetalae View MSA
122790258 5272 Eudicot View MSA
121350855 5274 Embryophyte View MSA
123381907 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain