Gene : Lsat_1_v5_gn_4_167580 L. sativa V8
Genomic Order:  4690 Name:  ? Lsat_1_v5_gn_4_167580
Secondary Identifier:  ? PAC:38933686
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_167580 0.5kb upstream 0.5kb upstream 1040   true Lsat_1_v8_lg_4: 339373104-339374143 Lactuca sativa
Lsat_1_v5_gn_4_167580 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 339373104-339373603 Lactuca sativa
Lsat_1_v5_gn_4_167580 0.5kb downstream 0.5kb downstream 1040   true Lsat_1_v8_lg_4: 339373604-339374643 Lactuca sativa
Lsat_1_v5_gn_4_167580 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 339374144-339374643 Lactuca sativa
Lsat_1_v5_gn_4_167580 1.0kb upstream 1.0kb upstream 1540   true Lsat_1_v8_lg_4: 339372604-339374143 Lactuca sativa
Lsat_1_v5_gn_4_167580 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 339372604-339373603 Lactuca sativa
Lsat_1_v5_gn_4_167580 1.0kb downstream 1.0kb downstream 1540   true Lsat_1_v8_lg_4: 339373604-339375143 Lactuca sativa
Lsat_1_v5_gn_4_167580 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 339374144-339375143 Lactuca sativa
Lsat_1_v5_gn_4_167580 2.0kb upstream 2.0kb upstream 2540   true Lsat_1_v8_lg_4: 339371604-339374143 Lactuca sativa
Lsat_1_v5_gn_4_167580 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 339371604-339373603 Lactuca sativa
Lsat_1_v5_gn_4_167580 2.0kb downstream 2.0kb downstream 2540   true Lsat_1_v8_lg_4: 339373604-339376143 Lactuca sativa
Lsat_1_v5_gn_4_167580 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 339374144-339376143 Lactuca sativa
Lsat_1_v5_gn_4_167580 5.0kb upstream 5.0kb upstream 5540   true Lsat_1_v8_lg_4: 339368604-339374143 Lactuca sativa
Lsat_1_v5_gn_4_167580 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 339368604-339373603 Lactuca sativa
Lsat_1_v5_gn_4_167580 5.0kb downstream 5.0kb downstream 5540   true Lsat_1_v8_lg_4: 339373604-339379143 Lactuca sativa
Lsat_1_v5_gn_4_167580 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 339374144-339379143 Lactuca sativa
Lsat_1_v5_gn_4_167580 10.0kb upstream 10.0kb upstream 10540   true Lsat_1_v8_lg_4: 339363604-339374143 Lactuca sativa
Lsat_1_v5_gn_4_167580 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 339363604-339373603 Lactuca sativa
Lsat_1_v5_gn_4_167580 10.0kb downstream 10.0kb downstream 10540   true Lsat_1_v8_lg_4: 339373604-339384143 Lactuca sativa
Lsat_1_v5_gn_4_167580 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 339374144-339384143 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121444578 5263 Asterids Singleton cluster - no MSA
123748035 5271 Pentapetalae View MSA
122772407 5272 Eudicot View MSA
122044935 5273 Angiosperm View MSA
121310364 5274 Embryophyte View MSA
123347866 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain