Gene : Lsat_1_v5_gn_4_46240 L. sativa V8
Defline:  (1 of 1) PTHR10024//PTHR10024:SF256 - SYNAPTOTAGMIN // C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN Genomic Order:  1378
Name:  ? Lsat_1_v5_gn_4_46240 Secondary Identifier:  ? PAC:38930534
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_46240 0.5kb upstream 0.5kb upstream 2786   true Lsat_1_v8_lg_4: 67839970-67842755 Lactuca sativa
Lsat_1_v5_gn_4_46240 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 67842256-67842755 Lactuca sativa
Lsat_1_v5_gn_4_46240 0.5kb downstream 0.5kb downstream 2786   true Lsat_1_v8_lg_4: 67839470-67842255 Lactuca sativa
Lsat_1_v5_gn_4_46240 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 67839470-67839969 Lactuca sativa
Lsat_1_v5_gn_4_46240 1.0kb upstream 1.0kb upstream 3286   true Lsat_1_v8_lg_4: 67839970-67843255 Lactuca sativa
Lsat_1_v5_gn_4_46240 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 67842256-67843255 Lactuca sativa
Lsat_1_v5_gn_4_46240 1.0kb downstream 1.0kb downstream 3286   true Lsat_1_v8_lg_4: 67838970-67842255 Lactuca sativa
Lsat_1_v5_gn_4_46240 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 67838970-67839969 Lactuca sativa
Lsat_1_v5_gn_4_46240 2.0kb upstream 2.0kb upstream 4286   true Lsat_1_v8_lg_4: 67839970-67844255 Lactuca sativa
Lsat_1_v5_gn_4_46240 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 67842256-67844255 Lactuca sativa
Lsat_1_v5_gn_4_46240 2.0kb downstream 2.0kb downstream 4286   true Lsat_1_v8_lg_4: 67837970-67842255 Lactuca sativa
Lsat_1_v5_gn_4_46240 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 67837970-67839969 Lactuca sativa
Lsat_1_v5_gn_4_46240 5.0kb upstream 5.0kb upstream 7286   true Lsat_1_v8_lg_4: 67839970-67847255 Lactuca sativa
Lsat_1_v5_gn_4_46240 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 67842256-67847255 Lactuca sativa
Lsat_1_v5_gn_4_46240 5.0kb downstream 5.0kb downstream 7286   true Lsat_1_v8_lg_4: 67834970-67842255 Lactuca sativa
Lsat_1_v5_gn_4_46240 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 67834970-67839969 Lactuca sativa
Lsat_1_v5_gn_4_46240 10.0kb upstream 10.0kb upstream 12286   true Lsat_1_v8_lg_4: 67839970-67852255 Lactuca sativa
Lsat_1_v5_gn_4_46240 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 67842256-67852255 Lactuca sativa
Lsat_1_v5_gn_4_46240 10.0kb downstream 10.0kb downstream 12286   true Lsat_1_v8_lg_4: 67829970-67842255 Lactuca sativa
Lsat_1_v5_gn_4_46240 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 67829970-67839969 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474111 5263 Asterids View MSA
123741936 5271 Pentapetalae View MSA
122796289 5272 Eudicot View MSA
122048920 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain