Gene : Lsat_1_v5_gn_4_46121 L. sativa V8
Defline:  (1 of 2) K09272 - structure-specific recognition protein 1 (SSRP1) Genomic Order:  1384
Name:  ? Lsat_1_v5_gn_4_46121 Secondary Identifier:  ? PAC:38935433
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_46121 0.5kb upstream 0.5kb upstream 4524   true Lsat_1_v8_lg_4: 67950058-67954581 Lactuca sativa
Lsat_1_v5_gn_4_46121 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 67950058-67950557 Lactuca sativa
Lsat_1_v5_gn_4_46121 0.5kb downstream 0.5kb downstream 4524   true Lsat_1_v8_lg_4: 67950558-67955081 Lactuca sativa
Lsat_1_v5_gn_4_46121 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 67954582-67955081 Lactuca sativa
Lsat_1_v5_gn_4_46121 1.0kb upstream 1.0kb upstream 5024   true Lsat_1_v8_lg_4: 67949558-67954581 Lactuca sativa
Lsat_1_v5_gn_4_46121 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 67949558-67950557 Lactuca sativa
Lsat_1_v5_gn_4_46121 1.0kb downstream 1.0kb downstream 5024   true Lsat_1_v8_lg_4: 67950558-67955581 Lactuca sativa
Lsat_1_v5_gn_4_46121 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 67954582-67955581 Lactuca sativa
Lsat_1_v5_gn_4_46121 2.0kb upstream 2.0kb upstream 6024   true Lsat_1_v8_lg_4: 67948558-67954581 Lactuca sativa
Lsat_1_v5_gn_4_46121 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 67948558-67950557 Lactuca sativa
Lsat_1_v5_gn_4_46121 2.0kb downstream 2.0kb downstream 6024   true Lsat_1_v8_lg_4: 67950558-67956581 Lactuca sativa
Lsat_1_v5_gn_4_46121 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 67954582-67956581 Lactuca sativa
Lsat_1_v5_gn_4_46121 5.0kb upstream 5.0kb upstream 9024   true Lsat_1_v8_lg_4: 67945558-67954581 Lactuca sativa
Lsat_1_v5_gn_4_46121 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 67945558-67950557 Lactuca sativa
Lsat_1_v5_gn_4_46121 5.0kb downstream 5.0kb downstream 9024   true Lsat_1_v8_lg_4: 67950558-67959581 Lactuca sativa
Lsat_1_v5_gn_4_46121 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 67954582-67959581 Lactuca sativa
Lsat_1_v5_gn_4_46121 10.0kb upstream 10.0kb upstream 14024   true Lsat_1_v8_lg_4: 67940558-67954581 Lactuca sativa
Lsat_1_v5_gn_4_46121 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 67940558-67950557 Lactuca sativa
Lsat_1_v5_gn_4_46121 10.0kb downstream 10.0kb downstream 14024   true Lsat_1_v8_lg_4: 67950558-67964581 Lactuca sativa
Lsat_1_v5_gn_4_46121 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 67954582-67964581 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467828 5263 Asterids View MSA
123744635 5271 Pentapetalae View MSA
122790158 5272 Eudicot View MSA
122041570 5273 Angiosperm View MSA
121347609 5274 Embryophyte View MSA
123424150 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain