Gene : Lsat_1_v5_gn_4_49221 L. sativa V8
Defline:  (1 of 3) K10956 - protein transport protein SEC61 subunit alpha (SEC61A) Genomic Order:  1440
Name:  ? Lsat_1_v5_gn_4_49221 Secondary Identifier:  ? PAC:38928612
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_49221 0.5kb upstream 0.5kb upstream 3742   true Lsat_1_v8_lg_4: 70480821-70484562 Lactuca sativa
Lsat_1_v5_gn_4_49221 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 70480821-70481320 Lactuca sativa
Lsat_1_v5_gn_4_49221 0.5kb downstream 0.5kb downstream 3742   true Lsat_1_v8_lg_4: 70481321-70485062 Lactuca sativa
Lsat_1_v5_gn_4_49221 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 70484563-70485062 Lactuca sativa
Lsat_1_v5_gn_4_49221 1.0kb upstream 1.0kb upstream 4242   true Lsat_1_v8_lg_4: 70480321-70484562 Lactuca sativa
Lsat_1_v5_gn_4_49221 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 70480321-70481320 Lactuca sativa
Lsat_1_v5_gn_4_49221 1.0kb downstream 1.0kb downstream 4242   true Lsat_1_v8_lg_4: 70481321-70485562 Lactuca sativa
Lsat_1_v5_gn_4_49221 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 70484563-70485562 Lactuca sativa
Lsat_1_v5_gn_4_49221 2.0kb upstream 2.0kb upstream 5242   true Lsat_1_v8_lg_4: 70479321-70484562 Lactuca sativa
Lsat_1_v5_gn_4_49221 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 70479321-70481320 Lactuca sativa
Lsat_1_v5_gn_4_49221 2.0kb downstream 2.0kb downstream 5242   true Lsat_1_v8_lg_4: 70481321-70486562 Lactuca sativa
Lsat_1_v5_gn_4_49221 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 70484563-70486562 Lactuca sativa
Lsat_1_v5_gn_4_49221 5.0kb upstream 5.0kb upstream 8242   true Lsat_1_v8_lg_4: 70476321-70484562 Lactuca sativa
Lsat_1_v5_gn_4_49221 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 70476321-70481320 Lactuca sativa
Lsat_1_v5_gn_4_49221 5.0kb downstream 5.0kb downstream 8242   true Lsat_1_v8_lg_4: 70481321-70489562 Lactuca sativa
Lsat_1_v5_gn_4_49221 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 70484563-70489562 Lactuca sativa
Lsat_1_v5_gn_4_49221 10.0kb upstream 10.0kb upstream 13242   true Lsat_1_v8_lg_4: 70471321-70484562 Lactuca sativa
Lsat_1_v5_gn_4_49221 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 70471321-70481320 Lactuca sativa
Lsat_1_v5_gn_4_49221 10.0kb downstream 10.0kb downstream 13242   true Lsat_1_v8_lg_4: 70481321-70494562 Lactuca sativa
Lsat_1_v5_gn_4_49221 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 70484563-70494562 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473091 5263 Asterids View MSA
123743159 5271 Pentapetalae View MSA
122792380 5272 Eudicot View MSA
122043956 5273 Angiosperm View MSA
121349680 5274 Embryophyte View MSA
123426638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain