Gene : Lsat_1_v5_gn_4_50621 L. sativa V8
Defline:  (1 of 3) PTHR21433//PTHR21433:SF4 - TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA // SUBFAMILY NOT NAMED Genomic Order:  1507
Name:  ? Lsat_1_v5_gn_4_50621 Secondary Identifier:  ? PAC:38934203
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_50621 0.5kb upstream 0.5kb upstream 3194   true Lsat_1_v8_lg_4: 75184301-75187494 Lactuca sativa
Lsat_1_v5_gn_4_50621 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 75186995-75187494 Lactuca sativa
Lsat_1_v5_gn_4_50621 0.5kb downstream 0.5kb downstream 3194   true Lsat_1_v8_lg_4: 75183801-75186994 Lactuca sativa
Lsat_1_v5_gn_4_50621 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 75183801-75184300 Lactuca sativa
Lsat_1_v5_gn_4_50621 1.0kb upstream 1.0kb upstream 3694   true Lsat_1_v8_lg_4: 75184301-75187994 Lactuca sativa
Lsat_1_v5_gn_4_50621 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 75186995-75187994 Lactuca sativa
Lsat_1_v5_gn_4_50621 1.0kb downstream 1.0kb downstream 3694   true Lsat_1_v8_lg_4: 75183301-75186994 Lactuca sativa
Lsat_1_v5_gn_4_50621 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 75183301-75184300 Lactuca sativa
Lsat_1_v5_gn_4_50621 2.0kb upstream 2.0kb upstream 4694   true Lsat_1_v8_lg_4: 75184301-75188994 Lactuca sativa
Lsat_1_v5_gn_4_50621 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 75186995-75188994 Lactuca sativa
Lsat_1_v5_gn_4_50621 2.0kb downstream 2.0kb downstream 4694   true Lsat_1_v8_lg_4: 75182301-75186994 Lactuca sativa
Lsat_1_v5_gn_4_50621 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 75182301-75184300 Lactuca sativa
Lsat_1_v5_gn_4_50621 5.0kb upstream 5.0kb upstream 7694   true Lsat_1_v8_lg_4: 75184301-75191994 Lactuca sativa
Lsat_1_v5_gn_4_50621 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 75186995-75191994 Lactuca sativa
Lsat_1_v5_gn_4_50621 5.0kb downstream 5.0kb downstream 7694   true Lsat_1_v8_lg_4: 75179301-75186994 Lactuca sativa
Lsat_1_v5_gn_4_50621 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 75179301-75184300 Lactuca sativa
Lsat_1_v5_gn_4_50621 10.0kb upstream 10.0kb upstream 12694   true Lsat_1_v8_lg_4: 75184301-75196994 Lactuca sativa
Lsat_1_v5_gn_4_50621 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 75186995-75196994 Lactuca sativa
Lsat_1_v5_gn_4_50621 10.0kb downstream 10.0kb downstream 12694   true Lsat_1_v8_lg_4: 75174301-75186994 Lactuca sativa
Lsat_1_v5_gn_4_50621 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 75174301-75184300 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474625 5263 Asterids View MSA
123747288 5271 Pentapetalae View MSA
122787986 5272 Eudicot View MSA
122046309 5273 Angiosperm View MSA
121351059 5274 Embryophyte View MSA
123427435 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain