Gene : Lsat_1_v5_gn_4_53920 L. sativa V8
Defline:  (1 of 28) PF05678 - VQ motif (VQ) Genomic Order:  1557
Name:  ? Lsat_1_v5_gn_4_53920 Secondary Identifier:  ? PAC:38930011
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_53920 0.5kb upstream 0.5kb upstream 2100   true Lsat_1_v8_lg_4: 77495985-77498084 Lactuca sativa
Lsat_1_v5_gn_4_53920 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 77497585-77498084 Lactuca sativa
Lsat_1_v5_gn_4_53920 0.5kb downstream 0.5kb downstream 2100   true Lsat_1_v8_lg_4: 77495485-77497584 Lactuca sativa
Lsat_1_v5_gn_4_53920 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 77495485-77495984 Lactuca sativa
Lsat_1_v5_gn_4_53920 1.0kb upstream 1.0kb upstream 2600   true Lsat_1_v8_lg_4: 77495985-77498584 Lactuca sativa
Lsat_1_v5_gn_4_53920 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 77497585-77498584 Lactuca sativa
Lsat_1_v5_gn_4_53920 1.0kb downstream 1.0kb downstream 2600   true Lsat_1_v8_lg_4: 77494985-77497584 Lactuca sativa
Lsat_1_v5_gn_4_53920 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 77494985-77495984 Lactuca sativa
Lsat_1_v5_gn_4_53920 2.0kb upstream 2.0kb upstream 3600   true Lsat_1_v8_lg_4: 77495985-77499584 Lactuca sativa
Lsat_1_v5_gn_4_53920 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 77497585-77499584 Lactuca sativa
Lsat_1_v5_gn_4_53920 2.0kb downstream 2.0kb downstream 3600   true Lsat_1_v8_lg_4: 77493985-77497584 Lactuca sativa
Lsat_1_v5_gn_4_53920 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 77493985-77495984 Lactuca sativa
Lsat_1_v5_gn_4_53920 5.0kb upstream 5.0kb upstream 6600   true Lsat_1_v8_lg_4: 77495985-77502584 Lactuca sativa
Lsat_1_v5_gn_4_53920 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 77497585-77502584 Lactuca sativa
Lsat_1_v5_gn_4_53920 5.0kb downstream 5.0kb downstream 6600   true Lsat_1_v8_lg_4: 77490985-77497584 Lactuca sativa
Lsat_1_v5_gn_4_53920 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 77490985-77495984 Lactuca sativa
Lsat_1_v5_gn_4_53920 10.0kb upstream 10.0kb upstream 11600   true Lsat_1_v8_lg_4: 77495985-77507584 Lactuca sativa
Lsat_1_v5_gn_4_53920 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 77497585-77507584 Lactuca sativa
Lsat_1_v5_gn_4_53920 10.0kb downstream 10.0kb downstream 11600   true Lsat_1_v8_lg_4: 77485985-77497584 Lactuca sativa
Lsat_1_v5_gn_4_53920 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 77485985-77495984 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480827 5263 Asterids View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain