Gene : Lsat_1_v5_gn_4_56020 L. sativa V8
Defline:  (1 of 1) 1.14.11.33//4.2.99.18 - DNA oxidative demethylase / Alkylated DNA repair protein // DNA-(apurinic or apyrimidinic site) lyase / Phage-T4 UV endonuclease Genomic Order:  1637
Name:  ? Lsat_1_v5_gn_4_56020 Secondary Identifier:  ? PAC:38934652
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_56020 0.5kb upstream 0.5kb upstream 3729   true Lsat_1_v8_lg_4: 84745351-84749079 Lactuca sativa
Lsat_1_v5_gn_4_56020 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 84745351-84745850 Lactuca sativa
Lsat_1_v5_gn_4_56020 0.5kb downstream 0.5kb downstream 3729   true Lsat_1_v8_lg_4: 84745851-84749579 Lactuca sativa
Lsat_1_v5_gn_4_56020 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 84749080-84749579 Lactuca sativa
Lsat_1_v5_gn_4_56020 1.0kb upstream 1.0kb upstream 4229   true Lsat_1_v8_lg_4: 84744851-84749079 Lactuca sativa
Lsat_1_v5_gn_4_56020 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 84744851-84745850 Lactuca sativa
Lsat_1_v5_gn_4_56020 1.0kb downstream 1.0kb downstream 4229   true Lsat_1_v8_lg_4: 84745851-84750079 Lactuca sativa
Lsat_1_v5_gn_4_56020 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 84749080-84750079 Lactuca sativa
Lsat_1_v5_gn_4_56020 2.0kb upstream 2.0kb upstream 5229   true Lsat_1_v8_lg_4: 84743851-84749079 Lactuca sativa
Lsat_1_v5_gn_4_56020 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 84743851-84745850 Lactuca sativa
Lsat_1_v5_gn_4_56020 2.0kb downstream 2.0kb downstream 5229   true Lsat_1_v8_lg_4: 84745851-84751079 Lactuca sativa
Lsat_1_v5_gn_4_56020 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 84749080-84751079 Lactuca sativa
Lsat_1_v5_gn_4_56020 5.0kb upstream 5.0kb upstream 8229   true Lsat_1_v8_lg_4: 84740851-84749079 Lactuca sativa
Lsat_1_v5_gn_4_56020 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 84740851-84745850 Lactuca sativa
Lsat_1_v5_gn_4_56020 5.0kb downstream 5.0kb downstream 8229   true Lsat_1_v8_lg_4: 84745851-84754079 Lactuca sativa
Lsat_1_v5_gn_4_56020 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 84749080-84754079 Lactuca sativa
Lsat_1_v5_gn_4_56020 10.0kb upstream 10.0kb upstream 13229   true Lsat_1_v8_lg_4: 84735851-84749079 Lactuca sativa
Lsat_1_v5_gn_4_56020 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 84735851-84745850 Lactuca sativa
Lsat_1_v5_gn_4_56020 10.0kb downstream 10.0kb downstream 13229   true Lsat_1_v8_lg_4: 84745851-84759079 Lactuca sativa
Lsat_1_v5_gn_4_56020 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 84749080-84759079 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467947 5263 Asterids View MSA
123737272 5271 Pentapetalae View MSA
122785941 5272 Eudicot View MSA
122044879 5273 Angiosperm View MSA
121344923 5274 Embryophyte View MSA
123425704 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain