Gene : Lsat_1_v5_gn_4_54680 L. sativa V8
Defline:  (1 of 3) K00422 - polyphenol oxidase (E1.10.3.1) Genomic Order:  1601
Name:  ? Lsat_1_v5_gn_4_54680 Secondary Identifier:  ? PAC:38931052
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6752 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_54680 0.5kb upstream 0.5kb upstream 2457   true Lsat_1_v8_lg_4: 80426726-80429182 Lactuca sativa
Lsat_1_v5_gn_4_54680 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 80426726-80427225 Lactuca sativa
Lsat_1_v5_gn_4_54680 0.5kb downstream 0.5kb downstream 2457   true Lsat_1_v8_lg_4: 80427226-80429682 Lactuca sativa
Lsat_1_v5_gn_4_54680 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 80429183-80429682 Lactuca sativa
Lsat_1_v5_gn_4_54680 1.0kb upstream 1.0kb upstream 2957   true Lsat_1_v8_lg_4: 80426226-80429182 Lactuca sativa
Lsat_1_v5_gn_4_54680 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 80426226-80427225 Lactuca sativa
Lsat_1_v5_gn_4_54680 1.0kb downstream 1.0kb downstream 2957   true Lsat_1_v8_lg_4: 80427226-80430182 Lactuca sativa
Lsat_1_v5_gn_4_54680 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 80429183-80430182 Lactuca sativa
Lsat_1_v5_gn_4_54680 2.0kb upstream 2.0kb upstream 3957   true Lsat_1_v8_lg_4: 80425226-80429182 Lactuca sativa
Lsat_1_v5_gn_4_54680 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 80425226-80427225 Lactuca sativa
Lsat_1_v5_gn_4_54680 2.0kb downstream 2.0kb downstream 3957   true Lsat_1_v8_lg_4: 80427226-80431182 Lactuca sativa
Lsat_1_v5_gn_4_54680 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 80429183-80431182 Lactuca sativa
Lsat_1_v5_gn_4_54680 5.0kb upstream 5.0kb upstream 6957   true Lsat_1_v8_lg_4: 80422226-80429182 Lactuca sativa
Lsat_1_v5_gn_4_54680 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 80422226-80427225 Lactuca sativa
Lsat_1_v5_gn_4_54680 5.0kb downstream 5.0kb downstream 6957   true Lsat_1_v8_lg_4: 80427226-80434182 Lactuca sativa
Lsat_1_v5_gn_4_54680 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 80429183-80434182 Lactuca sativa
Lsat_1_v5_gn_4_54680 10.0kb upstream 10.0kb upstream 11957   true Lsat_1_v8_lg_4: 80417226-80429182 Lactuca sativa
Lsat_1_v5_gn_4_54680 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 80417226-80427225 Lactuca sativa
Lsat_1_v5_gn_4_54680 10.0kb downstream 10.0kb downstream 11957   true Lsat_1_v8_lg_4: 80427226-80439182 Lactuca sativa
Lsat_1_v5_gn_4_54680 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 80429183-80439182 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027808 5273 Angiosperm View MSA
121472981 5263 Asterids View MSA
123751467 5271 Pentapetalae View MSA
122794188 5272 Eudicot View MSA
121350975 5274 Embryophyte View MSA
123428097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain