Gene : Lsat_1_v5_gn_4_55800 L. sativa V8
Defline:  (1 of 1) PTHR10799:SF705 - SNF2 , HELICASE AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1618
Name:  ? Lsat_1_v5_gn_4_55800 Secondary Identifier:  ? PAC:38929248
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_55800 0.5kb upstream 0.5kb upstream 6554   true Lsat_1_v8_lg_4: 82409401-82415954 Lactuca sativa
Lsat_1_v5_gn_4_55800 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 82415455-82415954 Lactuca sativa
Lsat_1_v5_gn_4_55800 0.5kb downstream 0.5kb downstream 6554   true Lsat_1_v8_lg_4: 82408901-82415454 Lactuca sativa
Lsat_1_v5_gn_4_55800 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 82408901-82409400 Lactuca sativa
Lsat_1_v5_gn_4_55800 1.0kb upstream 1.0kb upstream 7054   true Lsat_1_v8_lg_4: 82409401-82416454 Lactuca sativa
Lsat_1_v5_gn_4_55800 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 82415455-82416454 Lactuca sativa
Lsat_1_v5_gn_4_55800 1.0kb downstream 1.0kb downstream 7054   true Lsat_1_v8_lg_4: 82408401-82415454 Lactuca sativa
Lsat_1_v5_gn_4_55800 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 82408401-82409400 Lactuca sativa
Lsat_1_v5_gn_4_55800 2.0kb upstream 2.0kb upstream 8054   true Lsat_1_v8_lg_4: 82409401-82417454 Lactuca sativa
Lsat_1_v5_gn_4_55800 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 82415455-82417454 Lactuca sativa
Lsat_1_v5_gn_4_55800 2.0kb downstream 2.0kb downstream 8054   true Lsat_1_v8_lg_4: 82407401-82415454 Lactuca sativa
Lsat_1_v5_gn_4_55800 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 82407401-82409400 Lactuca sativa
Lsat_1_v5_gn_4_55800 5.0kb upstream 5.0kb upstream 11054   true Lsat_1_v8_lg_4: 82409401-82420454 Lactuca sativa
Lsat_1_v5_gn_4_55800 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 82415455-82420454 Lactuca sativa
Lsat_1_v5_gn_4_55800 5.0kb downstream 5.0kb downstream 11054   true Lsat_1_v8_lg_4: 82404401-82415454 Lactuca sativa
Lsat_1_v5_gn_4_55800 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 82404401-82409400 Lactuca sativa
Lsat_1_v5_gn_4_55800 10.0kb upstream 10.0kb upstream 16054   true Lsat_1_v8_lg_4: 82409401-82425454 Lactuca sativa
Lsat_1_v5_gn_4_55800 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 82415455-82425454 Lactuca sativa
Lsat_1_v5_gn_4_55800 10.0kb downstream 10.0kb downstream 16054   true Lsat_1_v8_lg_4: 82399401-82415454 Lactuca sativa
Lsat_1_v5_gn_4_55800 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 82399401-82409400 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471796 5263 Asterids View MSA
123743862 5271 Pentapetalae View MSA
122797067 5272 Eudicot View MSA
122048342 5273 Angiosperm View MSA
121347136 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain