Gene : Lsat_1_v5_gn_4_62941 L. sativa V8
Defline:  (1 of 3) K13456 - RPM1-interacting protein 4 (RIN4) Genomic Order:  1804
Name:  ? Lsat_1_v5_gn_4_62941 Secondary Identifier:  ? PAC:38932398
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_62941 0.5kb upstream 0.5kb upstream 4087   true Lsat_1_v8_lg_4: 94921447-94925533 Lactuca sativa
Lsat_1_v5_gn_4_62941 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 94921447-94921946 Lactuca sativa
Lsat_1_v5_gn_4_62941 0.5kb downstream 0.5kb downstream 4087   true Lsat_1_v8_lg_4: 94921947-94926033 Lactuca sativa
Lsat_1_v5_gn_4_62941 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 94925534-94926033 Lactuca sativa
Lsat_1_v5_gn_4_62941 1.0kb upstream 1.0kb upstream 4587   true Lsat_1_v8_lg_4: 94920947-94925533 Lactuca sativa
Lsat_1_v5_gn_4_62941 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 94920947-94921946 Lactuca sativa
Lsat_1_v5_gn_4_62941 1.0kb downstream 1.0kb downstream 4587   true Lsat_1_v8_lg_4: 94921947-94926533 Lactuca sativa
Lsat_1_v5_gn_4_62941 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 94925534-94926533 Lactuca sativa
Lsat_1_v5_gn_4_62941 2.0kb upstream 2.0kb upstream 5587   true Lsat_1_v8_lg_4: 94919947-94925533 Lactuca sativa
Lsat_1_v5_gn_4_62941 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 94919947-94921946 Lactuca sativa
Lsat_1_v5_gn_4_62941 2.0kb downstream 2.0kb downstream 5587   true Lsat_1_v8_lg_4: 94921947-94927533 Lactuca sativa
Lsat_1_v5_gn_4_62941 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 94925534-94927533 Lactuca sativa
Lsat_1_v5_gn_4_62941 5.0kb upstream 5.0kb upstream 8587   true Lsat_1_v8_lg_4: 94916947-94925533 Lactuca sativa
Lsat_1_v5_gn_4_62941 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 94916947-94921946 Lactuca sativa
Lsat_1_v5_gn_4_62941 5.0kb downstream 5.0kb downstream 8587   true Lsat_1_v8_lg_4: 94921947-94930533 Lactuca sativa
Lsat_1_v5_gn_4_62941 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 94925534-94930533 Lactuca sativa
Lsat_1_v5_gn_4_62941 10.0kb upstream 10.0kb upstream 13587   true Lsat_1_v8_lg_4: 94911947-94925533 Lactuca sativa
Lsat_1_v5_gn_4_62941 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 94911947-94921946 Lactuca sativa
Lsat_1_v5_gn_4_62941 10.0kb downstream 10.0kb downstream 13587   true Lsat_1_v8_lg_4: 94921947-94935533 Lactuca sativa
Lsat_1_v5_gn_4_62941 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 94925534-94935533 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471306 5263 Asterids View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain