Gene : Lsat_1_v5_gn_4_63101 L. sativa V8
Defline:  (1 of 1) PTHR21736//PTHR21736:SF20//PTHR32227//PTHR32227:SF60 - VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN OBERON 1-RELATED // FAMILY NOT NAMED // CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN Genomic Order:  1840
Name:  ? Lsat_1_v5_gn_4_63101 Secondary Identifier:  ? PAC:38931538
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_63101 0.5kb upstream 0.5kb upstream 7964   true Lsat_1_v8_lg_4: 98054173-98062136 Lactuca sativa
Lsat_1_v5_gn_4_63101 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 98054173-98054672 Lactuca sativa
Lsat_1_v5_gn_4_63101 0.5kb downstream 0.5kb downstream 7964   true Lsat_1_v8_lg_4: 98054673-98062636 Lactuca sativa
Lsat_1_v5_gn_4_63101 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 98062137-98062636 Lactuca sativa
Lsat_1_v5_gn_4_63101 1.0kb upstream 1.0kb upstream 8464   true Lsat_1_v8_lg_4: 98053673-98062136 Lactuca sativa
Lsat_1_v5_gn_4_63101 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 98053673-98054672 Lactuca sativa
Lsat_1_v5_gn_4_63101 1.0kb downstream 1.0kb downstream 8464   true Lsat_1_v8_lg_4: 98054673-98063136 Lactuca sativa
Lsat_1_v5_gn_4_63101 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 98062137-98063136 Lactuca sativa
Lsat_1_v5_gn_4_63101 2.0kb upstream 2.0kb upstream 9464   true Lsat_1_v8_lg_4: 98052673-98062136 Lactuca sativa
Lsat_1_v5_gn_4_63101 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 98052673-98054672 Lactuca sativa
Lsat_1_v5_gn_4_63101 2.0kb downstream 2.0kb downstream 9464   true Lsat_1_v8_lg_4: 98054673-98064136 Lactuca sativa
Lsat_1_v5_gn_4_63101 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 98062137-98064136 Lactuca sativa
Lsat_1_v5_gn_4_63101 5.0kb upstream 5.0kb upstream 12464   true Lsat_1_v8_lg_4: 98049673-98062136 Lactuca sativa
Lsat_1_v5_gn_4_63101 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 98049673-98054672 Lactuca sativa
Lsat_1_v5_gn_4_63101 5.0kb downstream 5.0kb downstream 12464   true Lsat_1_v8_lg_4: 98054673-98067136 Lactuca sativa
Lsat_1_v5_gn_4_63101 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 98062137-98067136 Lactuca sativa
Lsat_1_v5_gn_4_63101 10.0kb upstream 10.0kb upstream 17464   true Lsat_1_v8_lg_4: 98044673-98062136 Lactuca sativa
Lsat_1_v5_gn_4_63101 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 98044673-98054672 Lactuca sativa
Lsat_1_v5_gn_4_63101 10.0kb downstream 10.0kb downstream 17464   true Lsat_1_v8_lg_4: 98054673-98072136 Lactuca sativa
Lsat_1_v5_gn_4_63101 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 98062137-98072136 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470756 5263 Asterids View MSA
123747254 5271 Pentapetalae View MSA
122789487 5272 Eudicot View MSA
122041658 5273 Angiosperm View MSA
121346503 5274 Embryophyte View MSA
123380393 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain