Gene : Lsat_1_v5_gn_4_63581 L. sativa V8
Defline:  (1 of 1) PF01535//PF12854//PF13041//PF14009 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Domain of unknown function (DUF4228) (DUF4228) Genomic Order:  1845
Name:  ? Lsat_1_v5_gn_4_63581 Secondary Identifier:  ? PAC:38932070
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_63581 0.5kb upstream 0.5kb upstream 3548   true Lsat_1_v8_lg_4: 98315383-98318930 Lactuca sativa
Lsat_1_v5_gn_4_63581 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 98318431-98318930 Lactuca sativa
Lsat_1_v5_gn_4_63581 0.5kb downstream 0.5kb downstream 3548   true Lsat_1_v8_lg_4: 98314883-98318430 Lactuca sativa
Lsat_1_v5_gn_4_63581 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 98314883-98315382 Lactuca sativa
Lsat_1_v5_gn_4_63581 1.0kb upstream 1.0kb upstream 4048   true Lsat_1_v8_lg_4: 98315383-98319430 Lactuca sativa
Lsat_1_v5_gn_4_63581 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 98318431-98319430 Lactuca sativa
Lsat_1_v5_gn_4_63581 1.0kb downstream 1.0kb downstream 4048   true Lsat_1_v8_lg_4: 98314383-98318430 Lactuca sativa
Lsat_1_v5_gn_4_63581 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 98314383-98315382 Lactuca sativa
Lsat_1_v5_gn_4_63581 2.0kb upstream 2.0kb upstream 5048   true Lsat_1_v8_lg_4: 98315383-98320430 Lactuca sativa
Lsat_1_v5_gn_4_63581 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 98318431-98320430 Lactuca sativa
Lsat_1_v5_gn_4_63581 2.0kb downstream 2.0kb downstream 5048   true Lsat_1_v8_lg_4: 98313383-98318430 Lactuca sativa
Lsat_1_v5_gn_4_63581 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 98313383-98315382 Lactuca sativa
Lsat_1_v5_gn_4_63581 5.0kb upstream 5.0kb upstream 8048   true Lsat_1_v8_lg_4: 98315383-98323430 Lactuca sativa
Lsat_1_v5_gn_4_63581 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 98318431-98323430 Lactuca sativa
Lsat_1_v5_gn_4_63581 5.0kb downstream 5.0kb downstream 8048   true Lsat_1_v8_lg_4: 98310383-98318430 Lactuca sativa
Lsat_1_v5_gn_4_63581 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 98310383-98315382 Lactuca sativa
Lsat_1_v5_gn_4_63581 10.0kb upstream 10.0kb upstream 13048   true Lsat_1_v8_lg_4: 98315383-98328430 Lactuca sativa
Lsat_1_v5_gn_4_63581 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 98318431-98328430 Lactuca sativa
Lsat_1_v5_gn_4_63581 10.0kb downstream 10.0kb downstream 13048   true Lsat_1_v8_lg_4: 98305383-98318430 Lactuca sativa
Lsat_1_v5_gn_4_63581 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 98305383-98315382 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472478 5263 Asterids View MSA
123753301 5271 Pentapetalae View MSA
122789942 5272 Eudicot View MSA
122043539 5273 Angiosperm View MSA
121344903 5274 Embryophyte View MSA
123380125 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain