Gene : Lsat_1_v5_gn_4_65181 L. sativa V8
Defline:  (1 of 1) PTHR31807:SF6 - PROTEIN ENDOSPERM DEFECTIVE 1-RELATED Genomic Order:  1881
Name:  ? Lsat_1_v5_gn_4_65181 Secondary Identifier:  ? PAC:38929140
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_65181 0.5kb upstream 0.5kb upstream 2209   true Lsat_1_v8_lg_4: 99684715-99686923 Lactuca sativa
Lsat_1_v5_gn_4_65181 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 99684715-99685214 Lactuca sativa
Lsat_1_v5_gn_4_65181 0.5kb downstream 0.5kb downstream 2209   true Lsat_1_v8_lg_4: 99685215-99687423 Lactuca sativa
Lsat_1_v5_gn_4_65181 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 99686924-99687423 Lactuca sativa
Lsat_1_v5_gn_4_65181 1.0kb upstream 1.0kb upstream 2709   true Lsat_1_v8_lg_4: 99684215-99686923 Lactuca sativa
Lsat_1_v5_gn_4_65181 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 99684215-99685214 Lactuca sativa
Lsat_1_v5_gn_4_65181 1.0kb downstream 1.0kb downstream 2709   true Lsat_1_v8_lg_4: 99685215-99687923 Lactuca sativa
Lsat_1_v5_gn_4_65181 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 99686924-99687923 Lactuca sativa
Lsat_1_v5_gn_4_65181 2.0kb upstream 2.0kb upstream 3709   true Lsat_1_v8_lg_4: 99683215-99686923 Lactuca sativa
Lsat_1_v5_gn_4_65181 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 99683215-99685214 Lactuca sativa
Lsat_1_v5_gn_4_65181 2.0kb downstream 2.0kb downstream 3709   true Lsat_1_v8_lg_4: 99685215-99688923 Lactuca sativa
Lsat_1_v5_gn_4_65181 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 99686924-99688923 Lactuca sativa
Lsat_1_v5_gn_4_65181 5.0kb upstream 5.0kb upstream 6709   true Lsat_1_v8_lg_4: 99680215-99686923 Lactuca sativa
Lsat_1_v5_gn_4_65181 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 99680215-99685214 Lactuca sativa
Lsat_1_v5_gn_4_65181 5.0kb downstream 5.0kb downstream 6709   true Lsat_1_v8_lg_4: 99685215-99691923 Lactuca sativa
Lsat_1_v5_gn_4_65181 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 99686924-99691923 Lactuca sativa
Lsat_1_v5_gn_4_65181 10.0kb upstream 10.0kb upstream 11709   true Lsat_1_v8_lg_4: 99675215-99686923 Lactuca sativa
Lsat_1_v5_gn_4_65181 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 99675215-99685214 Lactuca sativa
Lsat_1_v5_gn_4_65181 10.0kb downstream 10.0kb downstream 11709   true Lsat_1_v8_lg_4: 99685215-99696923 Lactuca sativa
Lsat_1_v5_gn_4_65181 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 99686924-99696923 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467570 5263 Asterids View MSA
123752575 5271 Pentapetalae View MSA
122788375 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain