Gene : Lsat_1_v5_gn_4_65080 L. sativa V8
Defline:  (1 of 12) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  1886
Name:  ? Lsat_1_v5_gn_4_65080 Secondary Identifier:  ? PAC:38934397
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_65080 0.5kb upstream 0.5kb upstream 1487   true Lsat_1_v8_lg_4: 99723987-99725473 Lactuca sativa
Lsat_1_v5_gn_4_65080 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 99724974-99725473 Lactuca sativa
Lsat_1_v5_gn_4_65080 0.5kb downstream 0.5kb downstream 1487   true Lsat_1_v8_lg_4: 99723487-99724973 Lactuca sativa
Lsat_1_v5_gn_4_65080 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 99723487-99723986 Lactuca sativa
Lsat_1_v5_gn_4_65080 1.0kb upstream 1.0kb upstream 1987   true Lsat_1_v8_lg_4: 99723987-99725973 Lactuca sativa
Lsat_1_v5_gn_4_65080 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 99724974-99725973 Lactuca sativa
Lsat_1_v5_gn_4_65080 1.0kb downstream 1.0kb downstream 1987   true Lsat_1_v8_lg_4: 99722987-99724973 Lactuca sativa
Lsat_1_v5_gn_4_65080 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 99722987-99723986 Lactuca sativa
Lsat_1_v5_gn_4_65080 2.0kb upstream 2.0kb upstream 2987   true Lsat_1_v8_lg_4: 99723987-99726973 Lactuca sativa
Lsat_1_v5_gn_4_65080 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 99724974-99726973 Lactuca sativa
Lsat_1_v5_gn_4_65080 2.0kb downstream 2.0kb downstream 2987   true Lsat_1_v8_lg_4: 99721987-99724973 Lactuca sativa
Lsat_1_v5_gn_4_65080 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 99721987-99723986 Lactuca sativa
Lsat_1_v5_gn_4_65080 5.0kb upstream 5.0kb upstream 5987   true Lsat_1_v8_lg_4: 99723987-99729973 Lactuca sativa
Lsat_1_v5_gn_4_65080 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 99724974-99729973 Lactuca sativa
Lsat_1_v5_gn_4_65080 5.0kb downstream 5.0kb downstream 5987   true Lsat_1_v8_lg_4: 99718987-99724973 Lactuca sativa
Lsat_1_v5_gn_4_65080 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 99718987-99723986 Lactuca sativa
Lsat_1_v5_gn_4_65080 10.0kb upstream 10.0kb upstream 10987   true Lsat_1_v8_lg_4: 99723987-99734973 Lactuca sativa
Lsat_1_v5_gn_4_65080 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 99724974-99734973 Lactuca sativa
Lsat_1_v5_gn_4_65080 10.0kb downstream 10.0kb downstream 10987   true Lsat_1_v8_lg_4: 99713987-99724973 Lactuca sativa
Lsat_1_v5_gn_4_65080 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 99713987-99723986 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479434 5263 Asterids View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain