Gene : Lsat_1_v5_gn_4_66721 L. sativa V8
Defline:  (1 of 1) K16900 - two pore calcium channel protein, plant (TPC1, CCH1) Genomic Order:  1929
Name:  ? Lsat_1_v5_gn_4_66721 Secondary Identifier:  ? PAC:38932905
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_66721 0.5kb upstream 0.5kb upstream 9410   true Lsat_1_v8_lg_4: 102498324-102507733 Lactuca sativa
Lsat_1_v5_gn_4_66721 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 102498324-102498823 Lactuca sativa
Lsat_1_v5_gn_4_66721 0.5kb downstream 0.5kb downstream 9410   true Lsat_1_v8_lg_4: 102498824-102508233 Lactuca sativa
Lsat_1_v5_gn_4_66721 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 102507734-102508233 Lactuca sativa
Lsat_1_v5_gn_4_66721 1.0kb upstream 1.0kb upstream 9910   true Lsat_1_v8_lg_4: 102497824-102507733 Lactuca sativa
Lsat_1_v5_gn_4_66721 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 102497824-102498823 Lactuca sativa
Lsat_1_v5_gn_4_66721 1.0kb downstream 1.0kb downstream 9910   true Lsat_1_v8_lg_4: 102498824-102508733 Lactuca sativa
Lsat_1_v5_gn_4_66721 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 102507734-102508733 Lactuca sativa
Lsat_1_v5_gn_4_66721 2.0kb upstream 2.0kb upstream 10910   true Lsat_1_v8_lg_4: 102496824-102507733 Lactuca sativa
Lsat_1_v5_gn_4_66721 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 102496824-102498823 Lactuca sativa
Lsat_1_v5_gn_4_66721 2.0kb downstream 2.0kb downstream 10910   true Lsat_1_v8_lg_4: 102498824-102509733 Lactuca sativa
Lsat_1_v5_gn_4_66721 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 102507734-102509733 Lactuca sativa
Lsat_1_v5_gn_4_66721 5.0kb upstream 5.0kb upstream 13910   true Lsat_1_v8_lg_4: 102493824-102507733 Lactuca sativa
Lsat_1_v5_gn_4_66721 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 102493824-102498823 Lactuca sativa
Lsat_1_v5_gn_4_66721 5.0kb downstream 5.0kb downstream 13910   true Lsat_1_v8_lg_4: 102498824-102512733 Lactuca sativa
Lsat_1_v5_gn_4_66721 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 102507734-102512733 Lactuca sativa
Lsat_1_v5_gn_4_66721 10.0kb upstream 10.0kb upstream 18910   true Lsat_1_v8_lg_4: 102488824-102507733 Lactuca sativa
Lsat_1_v5_gn_4_66721 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 102488824-102498823 Lactuca sativa
Lsat_1_v5_gn_4_66721 10.0kb downstream 10.0kb downstream 18910   true Lsat_1_v8_lg_4: 102498824-102517733 Lactuca sativa
Lsat_1_v5_gn_4_66721 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 102507734-102517733 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466169 5263 Asterids View MSA
123736366 5271 Pentapetalae View MSA
122789852 5272 Eudicot View MSA
122042673 5273 Angiosperm View MSA
121347876 5274 Embryophyte View MSA
123380661 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain