Gene : Lsat_1_v5_gn_4_26940 L. sativa V8
Defline:  (1 of 2) 1.5.3.16//1.5.3.17 - Spermine oxidase / SMO // Non-specific polyamine oxidase / Polyamine oxidase Genomic Order:  750
Name:  ? Lsat_1_v5_gn_4_26940 Secondary Identifier:  ? PAC:38930245
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6441 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_26940 0.5kb upstream 0.5kb upstream 3942   true Lsat_1_v8_lg_4: 39015152-39019093 Lactuca sativa
Lsat_1_v5_gn_4_26940 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 39018594-39019093 Lactuca sativa
Lsat_1_v5_gn_4_26940 0.5kb downstream 0.5kb downstream 3942   true Lsat_1_v8_lg_4: 39014652-39018593 Lactuca sativa
Lsat_1_v5_gn_4_26940 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 39014652-39015151 Lactuca sativa
Lsat_1_v5_gn_4_26940 1.0kb upstream 1.0kb upstream 4442   true Lsat_1_v8_lg_4: 39015152-39019593 Lactuca sativa
Lsat_1_v5_gn_4_26940 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 39018594-39019593 Lactuca sativa
Lsat_1_v5_gn_4_26940 1.0kb downstream 1.0kb downstream 4442   true Lsat_1_v8_lg_4: 39014152-39018593 Lactuca sativa
Lsat_1_v5_gn_4_26940 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 39014152-39015151 Lactuca sativa
Lsat_1_v5_gn_4_26940 2.0kb upstream 2.0kb upstream 5442   true Lsat_1_v8_lg_4: 39015152-39020593 Lactuca sativa
Lsat_1_v5_gn_4_26940 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 39018594-39020593 Lactuca sativa
Lsat_1_v5_gn_4_26940 2.0kb downstream 2.0kb downstream 5442   true Lsat_1_v8_lg_4: 39013152-39018593 Lactuca sativa
Lsat_1_v5_gn_4_26940 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 39013152-39015151 Lactuca sativa
Lsat_1_v5_gn_4_26940 5.0kb upstream 5.0kb upstream 8442   true Lsat_1_v8_lg_4: 39015152-39023593 Lactuca sativa
Lsat_1_v5_gn_4_26940 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 39018594-39023593 Lactuca sativa
Lsat_1_v5_gn_4_26940 5.0kb downstream 5.0kb downstream 8442   true Lsat_1_v8_lg_4: 39010152-39018593 Lactuca sativa
Lsat_1_v5_gn_4_26940 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 39010152-39015151 Lactuca sativa
Lsat_1_v5_gn_4_26940 10.0kb upstream 10.0kb upstream 13442   true Lsat_1_v8_lg_4: 39015152-39028593 Lactuca sativa
Lsat_1_v5_gn_4_26940 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 39018594-39028593 Lactuca sativa
Lsat_1_v5_gn_4_26940 10.0kb downstream 10.0kb downstream 13442   true Lsat_1_v8_lg_4: 39005152-39018593 Lactuca sativa
Lsat_1_v5_gn_4_26940 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 39005152-39015151 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467371 5263 Asterids View MSA
123745734 5271 Pentapetalae View MSA
122788869 5272 Eudicot View MSA
122044597 5273 Angiosperm View MSA
121345919 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain