Gene : Lsat_1_v5_gn_4_26660 L. sativa V8
Defline:  (1 of 1) K14455 - aspartate aminotransferase, mitochondrial (GOT2) Genomic Order:  760
Name:  ? Lsat_1_v5_gn_4_26660 Secondary Identifier:  ? PAC:38931790
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ASPARTATE-DEG1-PWY Lactuca sativa pathologic  
Lsativa ASPARTATESYN-PWY Lactuca sativa pathologic  
Lsativa PWY-3001 Lactuca sativa pathologic  
Lsativa PWY-7115 Lactuca sativa pathologic  
Lsativa PWY-7117 Lactuca sativa pathologic  
Lsativa THRESYN-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_26660 0.5kb upstream 0.5kb upstream 3596   true Lsat_1_v8_lg_4: 39343339-39346934 Lactuca sativa
Lsat_1_v5_gn_4_26660 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 39346435-39346934 Lactuca sativa
Lsat_1_v5_gn_4_26660 0.5kb downstream 0.5kb downstream 3596   true Lsat_1_v8_lg_4: 39342839-39346434 Lactuca sativa
Lsat_1_v5_gn_4_26660 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 39342839-39343338 Lactuca sativa
Lsat_1_v5_gn_4_26660 1.0kb upstream 1.0kb upstream 4096   true Lsat_1_v8_lg_4: 39343339-39347434 Lactuca sativa
Lsat_1_v5_gn_4_26660 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 39346435-39347434 Lactuca sativa
Lsat_1_v5_gn_4_26660 1.0kb downstream 1.0kb downstream 4096   true Lsat_1_v8_lg_4: 39342339-39346434 Lactuca sativa
Lsat_1_v5_gn_4_26660 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 39342339-39343338 Lactuca sativa
Lsat_1_v5_gn_4_26660 2.0kb upstream 2.0kb upstream 5096   true Lsat_1_v8_lg_4: 39343339-39348434 Lactuca sativa
Lsat_1_v5_gn_4_26660 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 39346435-39348434 Lactuca sativa
Lsat_1_v5_gn_4_26660 2.0kb downstream 2.0kb downstream 5096   true Lsat_1_v8_lg_4: 39341339-39346434 Lactuca sativa
Lsat_1_v5_gn_4_26660 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 39341339-39343338 Lactuca sativa
Lsat_1_v5_gn_4_26660 5.0kb upstream 5.0kb upstream 8096   true Lsat_1_v8_lg_4: 39343339-39351434 Lactuca sativa
Lsat_1_v5_gn_4_26660 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 39346435-39351434 Lactuca sativa
Lsat_1_v5_gn_4_26660 5.0kb downstream 5.0kb downstream 8096   true Lsat_1_v8_lg_4: 39338339-39346434 Lactuca sativa
Lsat_1_v5_gn_4_26660 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 39338339-39343338 Lactuca sativa
Lsat_1_v5_gn_4_26660 10.0kb upstream 10.0kb upstream 13096   true Lsat_1_v8_lg_4: 39343339-39356434 Lactuca sativa
Lsat_1_v5_gn_4_26660 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 39346435-39356434 Lactuca sativa
Lsat_1_v5_gn_4_26660 10.0kb downstream 10.0kb downstream 13096   true Lsat_1_v8_lg_4: 39333339-39346434 Lactuca sativa
Lsat_1_v5_gn_4_26660 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 39333339-39343338 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481149 5263 Asterids View MSA
123737145 5271 Pentapetalae View MSA
122793092 5272 Eudicot View MSA
122046072 5273 Angiosperm View MSA
121344214 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain