Gene : Lsat_1_v5_gn_4_26620 L. sativa V8
Defline:  (1 of 2) PTHR33210:SF6 - PROTODERMAL FACTOR 1 Genomic Order:  761
Name:  ? Lsat_1_v5_gn_4_26620 Secondary Identifier:  ? PAC:38931702
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_26620 0.5kb upstream 0.5kb upstream 2573   true Lsat_1_v8_lg_4: 39357521-39360093 Lactuca sativa
Lsat_1_v5_gn_4_26620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 39359594-39360093 Lactuca sativa
Lsat_1_v5_gn_4_26620 0.5kb downstream 0.5kb downstream 2573   true Lsat_1_v8_lg_4: 39357021-39359593 Lactuca sativa
Lsat_1_v5_gn_4_26620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 39357021-39357520 Lactuca sativa
Lsat_1_v5_gn_4_26620 1.0kb upstream 1.0kb upstream 3073   true Lsat_1_v8_lg_4: 39357521-39360593 Lactuca sativa
Lsat_1_v5_gn_4_26620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 39359594-39360593 Lactuca sativa
Lsat_1_v5_gn_4_26620 1.0kb downstream 1.0kb downstream 3073   true Lsat_1_v8_lg_4: 39356521-39359593 Lactuca sativa
Lsat_1_v5_gn_4_26620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 39356521-39357520 Lactuca sativa
Lsat_1_v5_gn_4_26620 2.0kb upstream 2.0kb upstream 4073   true Lsat_1_v8_lg_4: 39357521-39361593 Lactuca sativa
Lsat_1_v5_gn_4_26620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 39359594-39361593 Lactuca sativa
Lsat_1_v5_gn_4_26620 2.0kb downstream 2.0kb downstream 4073   true Lsat_1_v8_lg_4: 39355521-39359593 Lactuca sativa
Lsat_1_v5_gn_4_26620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 39355521-39357520 Lactuca sativa
Lsat_1_v5_gn_4_26620 5.0kb upstream 5.0kb upstream 7073   true Lsat_1_v8_lg_4: 39357521-39364593 Lactuca sativa
Lsat_1_v5_gn_4_26620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 39359594-39364593 Lactuca sativa
Lsat_1_v5_gn_4_26620 5.0kb downstream 5.0kb downstream 7073   true Lsat_1_v8_lg_4: 39352521-39359593 Lactuca sativa
Lsat_1_v5_gn_4_26620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 39352521-39357520 Lactuca sativa
Lsat_1_v5_gn_4_26620 10.0kb upstream 10.0kb upstream 12073   true Lsat_1_v8_lg_4: 39357521-39369593 Lactuca sativa
Lsat_1_v5_gn_4_26620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 39359594-39369593 Lactuca sativa
Lsat_1_v5_gn_4_26620 10.0kb downstream 10.0kb downstream 12073   true Lsat_1_v8_lg_4: 39347521-39359593 Lactuca sativa
Lsat_1_v5_gn_4_26620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 39347521-39357520 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479938 5263 Asterids View MSA
123747098 5271 Pentapetalae View MSA
122793338 5272 Eudicot View MSA
122042133 5273 Angiosperm View MSA
121349082 5274 Embryophyte View MSA
123381156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain