Gene : Lsat_1_v5_gn_4_29881 L. sativa V8
Defline:  (1 of 1) PTHR10252//PTHR10252:SF40 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // SUBFAMILY NOT NAMED Genomic Order:  892
Name:  ? Lsat_1_v5_gn_4_29881 Secondary Identifier:  ? PAC:38933964
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_29881 0.5kb upstream 0.5kb upstream 2092   true Lsat_1_v8_lg_4: 44519298-44521389 Lactuca sativa
Lsat_1_v5_gn_4_29881 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 44520890-44521389 Lactuca sativa
Lsat_1_v5_gn_4_29881 0.5kb downstream 0.5kb downstream 2092   true Lsat_1_v8_lg_4: 44518798-44520889 Lactuca sativa
Lsat_1_v5_gn_4_29881 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 44518798-44519297 Lactuca sativa
Lsat_1_v5_gn_4_29881 1.0kb upstream 1.0kb upstream 2592   true Lsat_1_v8_lg_4: 44519298-44521889 Lactuca sativa
Lsat_1_v5_gn_4_29881 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 44520890-44521889 Lactuca sativa
Lsat_1_v5_gn_4_29881 1.0kb downstream 1.0kb downstream 2592   true Lsat_1_v8_lg_4: 44518298-44520889 Lactuca sativa
Lsat_1_v5_gn_4_29881 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 44518298-44519297 Lactuca sativa
Lsat_1_v5_gn_4_29881 2.0kb upstream 2.0kb upstream 3592   true Lsat_1_v8_lg_4: 44519298-44522889 Lactuca sativa
Lsat_1_v5_gn_4_29881 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 44520890-44522889 Lactuca sativa
Lsat_1_v5_gn_4_29881 2.0kb downstream 2.0kb downstream 3592   true Lsat_1_v8_lg_4: 44517298-44520889 Lactuca sativa
Lsat_1_v5_gn_4_29881 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 44517298-44519297 Lactuca sativa
Lsat_1_v5_gn_4_29881 5.0kb upstream 5.0kb upstream 6592   true Lsat_1_v8_lg_4: 44519298-44525889 Lactuca sativa
Lsat_1_v5_gn_4_29881 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 44520890-44525889 Lactuca sativa
Lsat_1_v5_gn_4_29881 5.0kb downstream 5.0kb downstream 6592   true Lsat_1_v8_lg_4: 44514298-44520889 Lactuca sativa
Lsat_1_v5_gn_4_29881 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 44514298-44519297 Lactuca sativa
Lsat_1_v5_gn_4_29881 10.0kb upstream 10.0kb upstream 11592   true Lsat_1_v8_lg_4: 44519298-44530889 Lactuca sativa
Lsat_1_v5_gn_4_29881 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 44520890-44530889 Lactuca sativa
Lsat_1_v5_gn_4_29881 10.0kb downstream 10.0kb downstream 11592   true Lsat_1_v8_lg_4: 44509298-44520889 Lactuca sativa
Lsat_1_v5_gn_4_29881 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 44509298-44519297 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471872 5263 Asterids View MSA
123742462 5271 Pentapetalae View MSA
122792661 5272 Eudicot View MSA
122049084 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121345521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain