Gene : Lsat_1_v5_gn_4_33681 L. sativa V8
Defline:  (1 of 3) PTHR33868:SF2 - EXPRESSED PROTEIN Genomic Order:  970
Name:  ? Lsat_1_v5_gn_4_33681 Secondary Identifier:  ? PAC:38931400
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_33681 0.5kb upstream 0.5kb upstream 2012   true Lsat_1_v8_lg_4: 48390000-48392011 Lactuca sativa
Lsat_1_v5_gn_4_33681 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 48390000-48390499 Lactuca sativa
Lsat_1_v5_gn_4_33681 0.5kb downstream 0.5kb downstream 2012   true Lsat_1_v8_lg_4: 48390500-48392511 Lactuca sativa
Lsat_1_v5_gn_4_33681 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 48392012-48392511 Lactuca sativa
Lsat_1_v5_gn_4_33681 1.0kb upstream 1.0kb upstream 2512   true Lsat_1_v8_lg_4: 48389500-48392011 Lactuca sativa
Lsat_1_v5_gn_4_33681 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 48389500-48390499 Lactuca sativa
Lsat_1_v5_gn_4_33681 1.0kb downstream 1.0kb downstream 2512   true Lsat_1_v8_lg_4: 48390500-48393011 Lactuca sativa
Lsat_1_v5_gn_4_33681 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 48392012-48393011 Lactuca sativa
Lsat_1_v5_gn_4_33681 2.0kb upstream 2.0kb upstream 3512   true Lsat_1_v8_lg_4: 48388500-48392011 Lactuca sativa
Lsat_1_v5_gn_4_33681 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 48388500-48390499 Lactuca sativa
Lsat_1_v5_gn_4_33681 2.0kb downstream 2.0kb downstream 3512   true Lsat_1_v8_lg_4: 48390500-48394011 Lactuca sativa
Lsat_1_v5_gn_4_33681 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 48392012-48394011 Lactuca sativa
Lsat_1_v5_gn_4_33681 5.0kb upstream 5.0kb upstream 6512   true Lsat_1_v8_lg_4: 48385500-48392011 Lactuca sativa
Lsat_1_v5_gn_4_33681 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 48385500-48390499 Lactuca sativa
Lsat_1_v5_gn_4_33681 5.0kb downstream 5.0kb downstream 6512   true Lsat_1_v8_lg_4: 48390500-48397011 Lactuca sativa
Lsat_1_v5_gn_4_33681 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 48392012-48397011 Lactuca sativa
Lsat_1_v5_gn_4_33681 10.0kb upstream 10.0kb upstream 11512   true Lsat_1_v8_lg_4: 48380500-48392011 Lactuca sativa
Lsat_1_v5_gn_4_33681 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 48380500-48390499 Lactuca sativa
Lsat_1_v5_gn_4_33681 10.0kb downstream 10.0kb downstream 11512   true Lsat_1_v8_lg_4: 48390500-48402011 Lactuca sativa
Lsat_1_v5_gn_4_33681 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 48392012-48402011 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479828 5263 Asterids View MSA
123747466 5271 Pentapetalae View MSA
122788794 5272 Eudicot View MSA
122043778 5273 Angiosperm View MSA
121348592 5274 Embryophyte View MSA
123380930 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain