Gene : Lsat_1_v5_gn_4_37061 L. sativa V8
Defline:  (1 of 1) K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Genomic Order:  1089
Name:  ? Lsat_1_v5_gn_4_37061 Secondary Identifier:  ? PAC:38934057
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_37061 0.5kb upstream 0.5kb upstream 3098   true Lsat_1_v8_lg_4: 54180333-54183430 Lactuca sativa
Lsat_1_v5_gn_4_37061 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 54182931-54183430 Lactuca sativa
Lsat_1_v5_gn_4_37061 0.5kb downstream 0.5kb downstream 3098   true Lsat_1_v8_lg_4: 54179833-54182930 Lactuca sativa
Lsat_1_v5_gn_4_37061 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 54179833-54180332 Lactuca sativa
Lsat_1_v5_gn_4_37061 1.0kb upstream 1.0kb upstream 3598   true Lsat_1_v8_lg_4: 54180333-54183930 Lactuca sativa
Lsat_1_v5_gn_4_37061 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 54182931-54183930 Lactuca sativa
Lsat_1_v5_gn_4_37061 1.0kb downstream 1.0kb downstream 3598   true Lsat_1_v8_lg_4: 54179333-54182930 Lactuca sativa
Lsat_1_v5_gn_4_37061 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 54179333-54180332 Lactuca sativa
Lsat_1_v5_gn_4_37061 2.0kb upstream 2.0kb upstream 4598   true Lsat_1_v8_lg_4: 54180333-54184930 Lactuca sativa
Lsat_1_v5_gn_4_37061 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 54182931-54184930 Lactuca sativa
Lsat_1_v5_gn_4_37061 2.0kb downstream 2.0kb downstream 4598   true Lsat_1_v8_lg_4: 54178333-54182930 Lactuca sativa
Lsat_1_v5_gn_4_37061 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 54178333-54180332 Lactuca sativa
Lsat_1_v5_gn_4_37061 5.0kb upstream 5.0kb upstream 7598   true Lsat_1_v8_lg_4: 54180333-54187930 Lactuca sativa
Lsat_1_v5_gn_4_37061 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 54182931-54187930 Lactuca sativa
Lsat_1_v5_gn_4_37061 5.0kb downstream 5.0kb downstream 7598   true Lsat_1_v8_lg_4: 54175333-54182930 Lactuca sativa
Lsat_1_v5_gn_4_37061 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 54175333-54180332 Lactuca sativa
Lsat_1_v5_gn_4_37061 10.0kb upstream 10.0kb upstream 12598   true Lsat_1_v8_lg_4: 54180333-54192930 Lactuca sativa
Lsat_1_v5_gn_4_37061 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 54182931-54192930 Lactuca sativa
Lsat_1_v5_gn_4_37061 10.0kb downstream 10.0kb downstream 12598   true Lsat_1_v8_lg_4: 54170333-54182930 Lactuca sativa
Lsat_1_v5_gn_4_37061 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 54170333-54180332 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474252 5263 Asterids View MSA
123740454 5271 Pentapetalae View MSA
122790295 5272 Eudicot View MSA
122047675 5273 Angiosperm View MSA
121344985 5274 Embryophyte View MSA
123424538 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain