Gene : Lsat_1_v5_gn_4_37980 L. sativa V8
Defline:  (1 of 2) PTHR33601//PTHR33601:SF1 - FAMILY NOT NAMED // LITTLE ZIPPER 1 PROTEIN-RELATED Genomic Order:  1125
Name:  ? Lsat_1_v5_gn_4_37980 Secondary Identifier:  ? PAC:38935460
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_37980 0.5kb upstream 0.5kb upstream 983   true Lsat_1_v8_lg_4: 56011305-56012287 Lactuca sativa
Lsat_1_v5_gn_4_37980 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 56011305-56011804 Lactuca sativa
Lsat_1_v5_gn_4_37980 0.5kb downstream 0.5kb downstream 983   true Lsat_1_v8_lg_4: 56011805-56012787 Lactuca sativa
Lsat_1_v5_gn_4_37980 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 56012288-56012787 Lactuca sativa
Lsat_1_v5_gn_4_37980 1.0kb upstream 1.0kb upstream 1483   true Lsat_1_v8_lg_4: 56010805-56012287 Lactuca sativa
Lsat_1_v5_gn_4_37980 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 56010805-56011804 Lactuca sativa
Lsat_1_v5_gn_4_37980 1.0kb downstream 1.0kb downstream 1483   true Lsat_1_v8_lg_4: 56011805-56013287 Lactuca sativa
Lsat_1_v5_gn_4_37980 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 56012288-56013287 Lactuca sativa
Lsat_1_v5_gn_4_37980 2.0kb upstream 2.0kb upstream 2483   true Lsat_1_v8_lg_4: 56009805-56012287 Lactuca sativa
Lsat_1_v5_gn_4_37980 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 56009805-56011804 Lactuca sativa
Lsat_1_v5_gn_4_37980 2.0kb downstream 2.0kb downstream 2483   true Lsat_1_v8_lg_4: 56011805-56014287 Lactuca sativa
Lsat_1_v5_gn_4_37980 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 56012288-56014287 Lactuca sativa
Lsat_1_v5_gn_4_37980 5.0kb upstream 5.0kb upstream 5483   true Lsat_1_v8_lg_4: 56006805-56012287 Lactuca sativa
Lsat_1_v5_gn_4_37980 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 56006805-56011804 Lactuca sativa
Lsat_1_v5_gn_4_37980 5.0kb downstream 5.0kb downstream 5483   true Lsat_1_v8_lg_4: 56011805-56017287 Lactuca sativa
Lsat_1_v5_gn_4_37980 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 56012288-56017287 Lactuca sativa
Lsat_1_v5_gn_4_37980 10.0kb upstream 10.0kb upstream 10483   true Lsat_1_v8_lg_4: 56001805-56012287 Lactuca sativa
Lsat_1_v5_gn_4_37980 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 56001805-56011804 Lactuca sativa
Lsat_1_v5_gn_4_37980 10.0kb downstream 10.0kb downstream 10483   true Lsat_1_v8_lg_4: 56011805-56022287 Lactuca sativa
Lsat_1_v5_gn_4_37980 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 56012288-56022287 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041483 5273 Angiosperm View MSA
121481497 5263 Asterids View MSA
123743735 5271 Pentapetalae View MSA
122787347 5272 Eudicot View MSA
121309855 5274 Embryophyte View MSA
123347500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain