Gene : Lsat_1_v5_gn_4_3980 L. sativa V8
Defline:  (1 of 2) PTHR32091//PTHR32091:SF0 - FAMILY NOT NAMED // EUKARYOTIC INITIATION FACTOR 4B-RELATED Genomic Order:  132
Name:  ? Lsat_1_v5_gn_4_3980 Secondary Identifier:  ? PAC:38931701
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_3980 0.5kb upstream 0.5kb upstream 3192   true Lsat_1_v8_lg_4: 6801343-6804534 Lactuca sativa
Lsat_1_v5_gn_4_3980 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 6804035-6804534 Lactuca sativa
Lsat_1_v5_gn_4_3980 0.5kb downstream 0.5kb downstream 3192   true Lsat_1_v8_lg_4: 6800843-6804034 Lactuca sativa
Lsat_1_v5_gn_4_3980 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 6800843-6801342 Lactuca sativa
Lsat_1_v5_gn_4_3980 1.0kb upstream 1.0kb upstream 3692   true Lsat_1_v8_lg_4: 6801343-6805034 Lactuca sativa
Lsat_1_v5_gn_4_3980 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 6804035-6805034 Lactuca sativa
Lsat_1_v5_gn_4_3980 1.0kb downstream 1.0kb downstream 3692   true Lsat_1_v8_lg_4: 6800343-6804034 Lactuca sativa
Lsat_1_v5_gn_4_3980 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 6800343-6801342 Lactuca sativa
Lsat_1_v5_gn_4_3980 2.0kb upstream 2.0kb upstream 4692   true Lsat_1_v8_lg_4: 6801343-6806034 Lactuca sativa
Lsat_1_v5_gn_4_3980 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 6804035-6806034 Lactuca sativa
Lsat_1_v5_gn_4_3980 2.0kb downstream 2.0kb downstream 4692   true Lsat_1_v8_lg_4: 6799343-6804034 Lactuca sativa
Lsat_1_v5_gn_4_3980 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 6799343-6801342 Lactuca sativa
Lsat_1_v5_gn_4_3980 5.0kb upstream 5.0kb upstream 7692   true Lsat_1_v8_lg_4: 6801343-6809034 Lactuca sativa
Lsat_1_v5_gn_4_3980 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 6804035-6809034 Lactuca sativa
Lsat_1_v5_gn_4_3980 5.0kb downstream 5.0kb downstream 7692   true Lsat_1_v8_lg_4: 6796343-6804034 Lactuca sativa
Lsat_1_v5_gn_4_3980 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 6796343-6801342 Lactuca sativa
Lsat_1_v5_gn_4_3980 10.0kb upstream 10.0kb upstream 12692   true Lsat_1_v8_lg_4: 6801343-6814034 Lactuca sativa
Lsat_1_v5_gn_4_3980 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 6804035-6814034 Lactuca sativa
Lsat_1_v5_gn_4_3980 10.0kb downstream 10.0kb downstream 12692   true Lsat_1_v8_lg_4: 6791343-6804034 Lactuca sativa
Lsat_1_v5_gn_4_3980 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 6791343-6801342 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471054 5263 Asterids View MSA
123749335 5271 Pentapetalae View MSA
122788320 5272 Eudicot View MSA
122051385 5273 Angiosperm View MSA
121351135 5274 Embryophyte View MSA
123426003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain