Gene : Lsat_1_v5_gn_4_39040 L. sativa V8
Defline:  (1 of 1) K02257 - protoheme IX farnesyltransferase (COX10) Genomic Order:  1130
Name:  ? Lsat_1_v5_gn_4_39040 Secondary Identifier:  ? PAC:38930160
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_39040 0.5kb upstream 0.5kb upstream 3926   true Lsat_1_v8_lg_4: 56495092-56499017 Lactuca sativa
Lsat_1_v5_gn_4_39040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 56495092-56495591 Lactuca sativa
Lsat_1_v5_gn_4_39040 0.5kb downstream 0.5kb downstream 3926   true Lsat_1_v8_lg_4: 56495592-56499517 Lactuca sativa
Lsat_1_v5_gn_4_39040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 56499018-56499517 Lactuca sativa
Lsat_1_v5_gn_4_39040 1.0kb upstream 1.0kb upstream 4426   true Lsat_1_v8_lg_4: 56494592-56499017 Lactuca sativa
Lsat_1_v5_gn_4_39040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 56494592-56495591 Lactuca sativa
Lsat_1_v5_gn_4_39040 1.0kb downstream 1.0kb downstream 4426   true Lsat_1_v8_lg_4: 56495592-56500017 Lactuca sativa
Lsat_1_v5_gn_4_39040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 56499018-56500017 Lactuca sativa
Lsat_1_v5_gn_4_39040 2.0kb upstream 2.0kb upstream 5426   true Lsat_1_v8_lg_4: 56493592-56499017 Lactuca sativa
Lsat_1_v5_gn_4_39040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 56493592-56495591 Lactuca sativa
Lsat_1_v5_gn_4_39040 2.0kb downstream 2.0kb downstream 5426   true Lsat_1_v8_lg_4: 56495592-56501017 Lactuca sativa
Lsat_1_v5_gn_4_39040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 56499018-56501017 Lactuca sativa
Lsat_1_v5_gn_4_39040 5.0kb upstream 5.0kb upstream 8426   true Lsat_1_v8_lg_4: 56490592-56499017 Lactuca sativa
Lsat_1_v5_gn_4_39040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 56490592-56495591 Lactuca sativa
Lsat_1_v5_gn_4_39040 5.0kb downstream 5.0kb downstream 8426   true Lsat_1_v8_lg_4: 56495592-56504017 Lactuca sativa
Lsat_1_v5_gn_4_39040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 56499018-56504017 Lactuca sativa
Lsat_1_v5_gn_4_39040 10.0kb upstream 10.0kb upstream 13426   true Lsat_1_v8_lg_4: 56485592-56499017 Lactuca sativa
Lsat_1_v5_gn_4_39040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 56485592-56495591 Lactuca sativa
Lsat_1_v5_gn_4_39040 10.0kb downstream 10.0kb downstream 13426   true Lsat_1_v8_lg_4: 56495592-56509017 Lactuca sativa
Lsat_1_v5_gn_4_39040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 56499018-56509017 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469245 5263 Asterids View MSA
123737937 5271 Pentapetalae View MSA
122790266 5272 Eudicot View MSA
122046986 5273 Angiosperm View MSA
121346504 5274 Embryophyte View MSA
123428600 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain