Gene : Lsat_1_v5_gn_4_4140 L. sativa V8
Defline:  (1 of 39) PF03000 - NPH3 family (NPH3) Genomic Order:  128
Name:  ? Lsat_1_v5_gn_4_4140 Secondary Identifier:  ? PAC:38928778
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_4140 0.5kb upstream 0.5kb upstream 3645   true Lsat_1_v8_lg_4: 6393430-6397074 Lactuca sativa
Lsat_1_v5_gn_4_4140 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 6396575-6397074 Lactuca sativa
Lsat_1_v5_gn_4_4140 0.5kb downstream 0.5kb downstream 3645   true Lsat_1_v8_lg_4: 6392930-6396574 Lactuca sativa
Lsat_1_v5_gn_4_4140 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 6392930-6393429 Lactuca sativa
Lsat_1_v5_gn_4_4140 1.0kb upstream 1.0kb upstream 4145   true Lsat_1_v8_lg_4: 6393430-6397574 Lactuca sativa
Lsat_1_v5_gn_4_4140 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 6396575-6397574 Lactuca sativa
Lsat_1_v5_gn_4_4140 1.0kb downstream 1.0kb downstream 4145   true Lsat_1_v8_lg_4: 6392430-6396574 Lactuca sativa
Lsat_1_v5_gn_4_4140 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 6392430-6393429 Lactuca sativa
Lsat_1_v5_gn_4_4140 2.0kb upstream 2.0kb upstream 5145   true Lsat_1_v8_lg_4: 6393430-6398574 Lactuca sativa
Lsat_1_v5_gn_4_4140 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 6396575-6398574 Lactuca sativa
Lsat_1_v5_gn_4_4140 2.0kb downstream 2.0kb downstream 5145   true Lsat_1_v8_lg_4: 6391430-6396574 Lactuca sativa
Lsat_1_v5_gn_4_4140 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 6391430-6393429 Lactuca sativa
Lsat_1_v5_gn_4_4140 5.0kb upstream 5.0kb upstream 8145   true Lsat_1_v8_lg_4: 6393430-6401574 Lactuca sativa
Lsat_1_v5_gn_4_4140 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 6396575-6401574 Lactuca sativa
Lsat_1_v5_gn_4_4140 5.0kb downstream 5.0kb downstream 8145   true Lsat_1_v8_lg_4: 6388430-6396574 Lactuca sativa
Lsat_1_v5_gn_4_4140 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 6388430-6393429 Lactuca sativa
Lsat_1_v5_gn_4_4140 10.0kb upstream 10.0kb upstream 13145   true Lsat_1_v8_lg_4: 6393430-6406574 Lactuca sativa
Lsat_1_v5_gn_4_4140 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 6396575-6406574 Lactuca sativa
Lsat_1_v5_gn_4_4140 10.0kb downstream 10.0kb downstream 13145   true Lsat_1_v8_lg_4: 6383430-6396574 Lactuca sativa
Lsat_1_v5_gn_4_4140 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 6383430-6393429 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478830 5263 Asterids View MSA
123741197 5271 Pentapetalae View MSA
122790545 5272 Eudicot View MSA
122042377 5273 Angiosperm View MSA
121350883 5274 Embryophyte View MSA
123381921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain