Gene : Lsat_1_v5_gn_4_40001 L. sativa V8
Defline:  (1 of 6) PTHR31307:SF3 - ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE PROTEIN Genomic Order:  1170
Name:  ? Lsat_1_v5_gn_4_40001 Secondary Identifier:  ? PAC:38933210
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_40001 0.5kb upstream 0.5kb upstream 2107   true Lsat_1_v8_lg_4: 58534188-58536294 Lactuca sativa
Lsat_1_v5_gn_4_40001 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 58534188-58534687 Lactuca sativa
Lsat_1_v5_gn_4_40001 0.5kb downstream 0.5kb downstream 2107   true Lsat_1_v8_lg_4: 58534688-58536794 Lactuca sativa
Lsat_1_v5_gn_4_40001 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 58536295-58536794 Lactuca sativa
Lsat_1_v5_gn_4_40001 1.0kb upstream 1.0kb upstream 2607   true Lsat_1_v8_lg_4: 58533688-58536294 Lactuca sativa
Lsat_1_v5_gn_4_40001 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 58533688-58534687 Lactuca sativa
Lsat_1_v5_gn_4_40001 1.0kb downstream 1.0kb downstream 2607   true Lsat_1_v8_lg_4: 58534688-58537294 Lactuca sativa
Lsat_1_v5_gn_4_40001 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 58536295-58537294 Lactuca sativa
Lsat_1_v5_gn_4_40001 2.0kb upstream 2.0kb upstream 3607   true Lsat_1_v8_lg_4: 58532688-58536294 Lactuca sativa
Lsat_1_v5_gn_4_40001 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 58532688-58534687 Lactuca sativa
Lsat_1_v5_gn_4_40001 2.0kb downstream 2.0kb downstream 3607   true Lsat_1_v8_lg_4: 58534688-58538294 Lactuca sativa
Lsat_1_v5_gn_4_40001 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 58536295-58538294 Lactuca sativa
Lsat_1_v5_gn_4_40001 5.0kb upstream 5.0kb upstream 6607   true Lsat_1_v8_lg_4: 58529688-58536294 Lactuca sativa
Lsat_1_v5_gn_4_40001 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 58529688-58534687 Lactuca sativa
Lsat_1_v5_gn_4_40001 5.0kb downstream 5.0kb downstream 6607   true Lsat_1_v8_lg_4: 58534688-58541294 Lactuca sativa
Lsat_1_v5_gn_4_40001 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 58536295-58541294 Lactuca sativa
Lsat_1_v5_gn_4_40001 10.0kb upstream 10.0kb upstream 11607   true Lsat_1_v8_lg_4: 58524688-58536294 Lactuca sativa
Lsat_1_v5_gn_4_40001 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 58524688-58534687 Lactuca sativa
Lsat_1_v5_gn_4_40001 10.0kb downstream 10.0kb downstream 11607   true Lsat_1_v8_lg_4: 58534688-58546294 Lactuca sativa
Lsat_1_v5_gn_4_40001 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 58536295-58546294 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477056 5263 Asterids View MSA
123747324 5271 Pentapetalae View MSA
122790376 5272 Eudicot View MSA
122048588 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain