Gene : Lsat_1_v5_gn_4_421 L. sativa V8
Defline:  (1 of 2) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED Genomic Order:  42
Name:  ? Lsat_1_v5_gn_4_421 Secondary Identifier:  ? PAC:38928856
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_421 0.5kb upstream 0.5kb upstream 3629   true Lsat_1_v8_lg_4: 2579521-2583149 Lactuca sativa
Lsat_1_v5_gn_4_421 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 2582650-2583149 Lactuca sativa
Lsat_1_v5_gn_4_421 0.5kb downstream 0.5kb downstream 3629   true Lsat_1_v8_lg_4: 2579021-2582649 Lactuca sativa
Lsat_1_v5_gn_4_421 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 2579021-2579520 Lactuca sativa
Lsat_1_v5_gn_4_421 1.0kb upstream 1.0kb upstream 4129   true Lsat_1_v8_lg_4: 2579521-2583649 Lactuca sativa
Lsat_1_v5_gn_4_421 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 2582650-2583649 Lactuca sativa
Lsat_1_v5_gn_4_421 1.0kb downstream 1.0kb downstream 4129   true Lsat_1_v8_lg_4: 2578521-2582649 Lactuca sativa
Lsat_1_v5_gn_4_421 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 2578521-2579520 Lactuca sativa
Lsat_1_v5_gn_4_421 2.0kb upstream 2.0kb upstream 5129   true Lsat_1_v8_lg_4: 2579521-2584649 Lactuca sativa
Lsat_1_v5_gn_4_421 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 2582650-2584649 Lactuca sativa
Lsat_1_v5_gn_4_421 2.0kb downstream 2.0kb downstream 5129   true Lsat_1_v8_lg_4: 2577521-2582649 Lactuca sativa
Lsat_1_v5_gn_4_421 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 2577521-2579520 Lactuca sativa
Lsat_1_v5_gn_4_421 5.0kb upstream 5.0kb upstream 8129   true Lsat_1_v8_lg_4: 2579521-2587649 Lactuca sativa
Lsat_1_v5_gn_4_421 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 2582650-2587649 Lactuca sativa
Lsat_1_v5_gn_4_421 5.0kb downstream 5.0kb downstream 8129   true Lsat_1_v8_lg_4: 2574521-2582649 Lactuca sativa
Lsat_1_v5_gn_4_421 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 2574521-2579520 Lactuca sativa
Lsat_1_v5_gn_4_421 10.0kb upstream 10.0kb upstream 13129   true Lsat_1_v8_lg_4: 2579521-2592649 Lactuca sativa
Lsat_1_v5_gn_4_421 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 2582650-2592649 Lactuca sativa
Lsat_1_v5_gn_4_421 10.0kb downstream 10.0kb downstream 13129   true Lsat_1_v8_lg_4: 2569521-2582649 Lactuca sativa
Lsat_1_v5_gn_4_421 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 2569521-2579520 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027881 5273 Angiosperm View MSA
121471507 5263 Asterids View MSA
123745065 5271 Pentapetalae View MSA
122789377 5272 Eudicot View MSA
123428908 5275 Viridiplantae View MSA
121351727 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain