Gene : Lsat_1_v5_gn_4_44160 L. sativa V8
Defline:  (1 of 2) PTHR31251:SF4 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8 Genomic Order:  1343
Name:  ? Lsat_1_v5_gn_4_44160 Secondary Identifier:  ? PAC:38929773
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_44160 0.5kb upstream 0.5kb upstream 3136   true Lsat_1_v8_lg_4: 66189382-66192517 Lactuca sativa
Lsat_1_v5_gn_4_44160 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 66192018-66192517 Lactuca sativa
Lsat_1_v5_gn_4_44160 0.5kb downstream 0.5kb downstream 3136   true Lsat_1_v8_lg_4: 66188882-66192017 Lactuca sativa
Lsat_1_v5_gn_4_44160 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 66188882-66189381 Lactuca sativa
Lsat_1_v5_gn_4_44160 1.0kb upstream 1.0kb upstream 3636   true Lsat_1_v8_lg_4: 66189382-66193017 Lactuca sativa
Lsat_1_v5_gn_4_44160 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 66192018-66193017 Lactuca sativa
Lsat_1_v5_gn_4_44160 1.0kb downstream 1.0kb downstream 3636   true Lsat_1_v8_lg_4: 66188382-66192017 Lactuca sativa
Lsat_1_v5_gn_4_44160 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 66188382-66189381 Lactuca sativa
Lsat_1_v5_gn_4_44160 2.0kb upstream 2.0kb upstream 4636   true Lsat_1_v8_lg_4: 66189382-66194017 Lactuca sativa
Lsat_1_v5_gn_4_44160 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 66192018-66194017 Lactuca sativa
Lsat_1_v5_gn_4_44160 2.0kb downstream 2.0kb downstream 4636   true Lsat_1_v8_lg_4: 66187382-66192017 Lactuca sativa
Lsat_1_v5_gn_4_44160 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 66187382-66189381 Lactuca sativa
Lsat_1_v5_gn_4_44160 5.0kb upstream 5.0kb upstream 7636   true Lsat_1_v8_lg_4: 66189382-66197017 Lactuca sativa
Lsat_1_v5_gn_4_44160 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 66192018-66197017 Lactuca sativa
Lsat_1_v5_gn_4_44160 5.0kb downstream 5.0kb downstream 7636   true Lsat_1_v8_lg_4: 66184382-66192017 Lactuca sativa
Lsat_1_v5_gn_4_44160 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 66184382-66189381 Lactuca sativa
Lsat_1_v5_gn_4_44160 10.0kb upstream 10.0kb upstream 12636   true Lsat_1_v8_lg_4: 66189382-66202017 Lactuca sativa
Lsat_1_v5_gn_4_44160 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 66192018-66202017 Lactuca sativa
Lsat_1_v5_gn_4_44160 10.0kb downstream 10.0kb downstream 12636   true Lsat_1_v8_lg_4: 66179382-66192017 Lactuca sativa
Lsat_1_v5_gn_4_44160 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 66179382-66189381 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469412 5263 Asterids View MSA
123751132 5271 Pentapetalae View MSA
122790055 5272 Eudicot View MSA
122042410 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121309962 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain