Gene : Lsat_1_v5_gn_4_43240 L. sativa V8
Defline:  (1 of 1) K10885 - ATP-dependent DNA helicase 2 subunit 2 (XRCC5, KU80, G22P2) Genomic Order:  1279
Name:  ? Lsat_1_v5_gn_4_43240 Secondary Identifier:  ? PAC:38930782
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_43240 0.5kb upstream 0.5kb upstream 5002   true Lsat_1_v8_lg_4: 62862471-62867472 Lactuca sativa
Lsat_1_v5_gn_4_43240 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 62866973-62867472 Lactuca sativa
Lsat_1_v5_gn_4_43240 0.5kb downstream 0.5kb downstream 5002   true Lsat_1_v8_lg_4: 62861971-62866972 Lactuca sativa
Lsat_1_v5_gn_4_43240 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 62861971-62862470 Lactuca sativa
Lsat_1_v5_gn_4_43240 1.0kb upstream 1.0kb upstream 5502   true Lsat_1_v8_lg_4: 62862471-62867972 Lactuca sativa
Lsat_1_v5_gn_4_43240 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 62866973-62867972 Lactuca sativa
Lsat_1_v5_gn_4_43240 1.0kb downstream 1.0kb downstream 5502   true Lsat_1_v8_lg_4: 62861471-62866972 Lactuca sativa
Lsat_1_v5_gn_4_43240 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 62861471-62862470 Lactuca sativa
Lsat_1_v5_gn_4_43240 2.0kb upstream 2.0kb upstream 6502   true Lsat_1_v8_lg_4: 62862471-62868972 Lactuca sativa
Lsat_1_v5_gn_4_43240 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 62866973-62868972 Lactuca sativa
Lsat_1_v5_gn_4_43240 2.0kb downstream 2.0kb downstream 6502   true Lsat_1_v8_lg_4: 62860471-62866972 Lactuca sativa
Lsat_1_v5_gn_4_43240 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 62860471-62862470 Lactuca sativa
Lsat_1_v5_gn_4_43240 5.0kb upstream 5.0kb upstream 9502   true Lsat_1_v8_lg_4: 62862471-62871972 Lactuca sativa
Lsat_1_v5_gn_4_43240 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 62866973-62871972 Lactuca sativa
Lsat_1_v5_gn_4_43240 5.0kb downstream 5.0kb downstream 9502   true Lsat_1_v8_lg_4: 62857471-62866972 Lactuca sativa
Lsat_1_v5_gn_4_43240 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 62857471-62862470 Lactuca sativa
Lsat_1_v5_gn_4_43240 10.0kb upstream 10.0kb upstream 14502   true Lsat_1_v8_lg_4: 62862471-62876972 Lactuca sativa
Lsat_1_v5_gn_4_43240 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 62866973-62876972 Lactuca sativa
Lsat_1_v5_gn_4_43240 10.0kb downstream 10.0kb downstream 14502   true Lsat_1_v8_lg_4: 62852471-62866972 Lactuca sativa
Lsat_1_v5_gn_4_43240 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 62852471-62862470 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470930 5263 Asterids View MSA
123746123 5271 Pentapetalae View MSA
122786375 5272 Eudicot View MSA
122050480 5273 Angiosperm View MSA
121345940 5274 Embryophyte View MSA
123427822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain