Gene : Lsat_1_v5_gn_4_43321 L. sativa V8
Defline:  (1 of 2) PTHR33593:SF2 - F5O11.5 Genomic Order:  1277
Name:  ? Lsat_1_v5_gn_4_43321 Secondary Identifier:  ? PAC:38931551
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_43321 0.5kb upstream 0.5kb upstream 1960   true Lsat_1_v8_lg_4: 62810601-62812560 Lactuca sativa
Lsat_1_v5_gn_4_43321 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 62810601-62811100 Lactuca sativa
Lsat_1_v5_gn_4_43321 0.5kb downstream 0.5kb downstream 1960   true Lsat_1_v8_lg_4: 62811101-62813060 Lactuca sativa
Lsat_1_v5_gn_4_43321 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 62812561-62813060 Lactuca sativa
Lsat_1_v5_gn_4_43321 1.0kb upstream 1.0kb upstream 2460   true Lsat_1_v8_lg_4: 62810101-62812560 Lactuca sativa
Lsat_1_v5_gn_4_43321 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 62810101-62811100 Lactuca sativa
Lsat_1_v5_gn_4_43321 1.0kb downstream 1.0kb downstream 2460   true Lsat_1_v8_lg_4: 62811101-62813560 Lactuca sativa
Lsat_1_v5_gn_4_43321 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 62812561-62813560 Lactuca sativa
Lsat_1_v5_gn_4_43321 2.0kb upstream 2.0kb upstream 3460   true Lsat_1_v8_lg_4: 62809101-62812560 Lactuca sativa
Lsat_1_v5_gn_4_43321 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 62809101-62811100 Lactuca sativa
Lsat_1_v5_gn_4_43321 2.0kb downstream 2.0kb downstream 3460   true Lsat_1_v8_lg_4: 62811101-62814560 Lactuca sativa
Lsat_1_v5_gn_4_43321 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 62812561-62814560 Lactuca sativa
Lsat_1_v5_gn_4_43321 5.0kb upstream 5.0kb upstream 6460   true Lsat_1_v8_lg_4: 62806101-62812560 Lactuca sativa
Lsat_1_v5_gn_4_43321 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 62806101-62811100 Lactuca sativa
Lsat_1_v5_gn_4_43321 5.0kb downstream 5.0kb downstream 6460   true Lsat_1_v8_lg_4: 62811101-62817560 Lactuca sativa
Lsat_1_v5_gn_4_43321 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 62812561-62817560 Lactuca sativa
Lsat_1_v5_gn_4_43321 10.0kb upstream 10.0kb upstream 11460   true Lsat_1_v8_lg_4: 62801101-62812560 Lactuca sativa
Lsat_1_v5_gn_4_43321 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 62801101-62811100 Lactuca sativa
Lsat_1_v5_gn_4_43321 10.0kb downstream 10.0kb downstream 11460   true Lsat_1_v8_lg_4: 62811101-62822560 Lactuca sativa
Lsat_1_v5_gn_4_43321 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 62812561-62822560 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041482 5273 Angiosperm View MSA
121464375 5263 Asterids View MSA
123743657 5271 Pentapetalae View MSA
122790548 5272 Eudicot View MSA
121348528 5274 Embryophyte View MSA
123380900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain