Gene : Lsat_1_v5_gn_4_44600 L. sativa V8
Defline:  (1 of 14) PF04640 - PLATZ transcription factor (PLATZ) Genomic Order:  1308
Name:  ? Lsat_1_v5_gn_4_44600 Secondary Identifier:  ? PAC:38933431
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_44600 0.5kb upstream 0.5kb upstream 2185   true Lsat_1_v8_lg_4: 63822220-63824404 Lactuca sativa
Lsat_1_v5_gn_4_44600 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 63823905-63824404 Lactuca sativa
Lsat_1_v5_gn_4_44600 0.5kb downstream 0.5kb downstream 2185   true Lsat_1_v8_lg_4: 63821720-63823904 Lactuca sativa
Lsat_1_v5_gn_4_44600 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 63821720-63822219 Lactuca sativa
Lsat_1_v5_gn_4_44600 1.0kb upstream 1.0kb upstream 2685   true Lsat_1_v8_lg_4: 63822220-63824904 Lactuca sativa
Lsat_1_v5_gn_4_44600 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 63823905-63824904 Lactuca sativa
Lsat_1_v5_gn_4_44600 1.0kb downstream 1.0kb downstream 2685   true Lsat_1_v8_lg_4: 63821220-63823904 Lactuca sativa
Lsat_1_v5_gn_4_44600 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 63821220-63822219 Lactuca sativa
Lsat_1_v5_gn_4_44600 2.0kb upstream 2.0kb upstream 3685   true Lsat_1_v8_lg_4: 63822220-63825904 Lactuca sativa
Lsat_1_v5_gn_4_44600 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 63823905-63825904 Lactuca sativa
Lsat_1_v5_gn_4_44600 2.0kb downstream 2.0kb downstream 3685   true Lsat_1_v8_lg_4: 63820220-63823904 Lactuca sativa
Lsat_1_v5_gn_4_44600 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 63820220-63822219 Lactuca sativa
Lsat_1_v5_gn_4_44600 5.0kb upstream 5.0kb upstream 6685   true Lsat_1_v8_lg_4: 63822220-63828904 Lactuca sativa
Lsat_1_v5_gn_4_44600 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 63823905-63828904 Lactuca sativa
Lsat_1_v5_gn_4_44600 5.0kb downstream 5.0kb downstream 6685   true Lsat_1_v8_lg_4: 63817220-63823904 Lactuca sativa
Lsat_1_v5_gn_4_44600 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 63817220-63822219 Lactuca sativa
Lsat_1_v5_gn_4_44600 10.0kb upstream 10.0kb upstream 11685   true Lsat_1_v8_lg_4: 63822220-63833904 Lactuca sativa
Lsat_1_v5_gn_4_44600 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 63823905-63833904 Lactuca sativa
Lsat_1_v5_gn_4_44600 10.0kb downstream 10.0kb downstream 11685   true Lsat_1_v8_lg_4: 63812220-63823904 Lactuca sativa
Lsat_1_v5_gn_4_44600 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 63812220-63822219 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475811 5263 Asterids View MSA
123750215 5271 Pentapetalae View MSA
122789413 5272 Eudicot View MSA
122043598 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain