Gene : Lsat_1_v5_gn_4_93741 L. sativa V8
Defline:  (1 of 2) K13998 - dihydrofolate reductase / thymidylate synthase (DHFR-TS) Genomic Order:  2726
Name:  ? Lsat_1_v5_gn_4_93741 Secondary Identifier:  ? PAC:38934025
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-3841 Lactuca sativa pathologic  
Lsativa PWY-6612 Lactuca sativa pathologic  
Lsativa PWY-6614 Lactuca sativa pathologic  
Lsativa PWY-7184 Lactuca sativa pathologic  
Lsativa PWY-7199 Lactuca sativa pathologic  
Lsativa PWY-7200 Lactuca sativa pathologic  
Lsativa PWY-7210 Lactuca sativa pathologic  
Lsativa PWY-7211 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_93741 0.5kb upstream 0.5kb upstream 5092   true Lsat_1_v8_lg_4: 154928368-154933459 Lactuca sativa
Lsat_1_v5_gn_4_93741 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 154928368-154928867 Lactuca sativa
Lsat_1_v5_gn_4_93741 0.5kb downstream 0.5kb downstream 5092   true Lsat_1_v8_lg_4: 154928868-154933959 Lactuca sativa
Lsat_1_v5_gn_4_93741 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 154933460-154933959 Lactuca sativa
Lsat_1_v5_gn_4_93741 1.0kb upstream 1.0kb upstream 5592   true Lsat_1_v8_lg_4: 154927868-154933459 Lactuca sativa
Lsat_1_v5_gn_4_93741 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 154927868-154928867 Lactuca sativa
Lsat_1_v5_gn_4_93741 1.0kb downstream 1.0kb downstream 5592   true Lsat_1_v8_lg_4: 154928868-154934459 Lactuca sativa
Lsat_1_v5_gn_4_93741 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 154933460-154934459 Lactuca sativa
Lsat_1_v5_gn_4_93741 2.0kb upstream 2.0kb upstream 6592   true Lsat_1_v8_lg_4: 154926868-154933459 Lactuca sativa
Lsat_1_v5_gn_4_93741 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 154926868-154928867 Lactuca sativa
Lsat_1_v5_gn_4_93741 2.0kb downstream 2.0kb downstream 6592   true Lsat_1_v8_lg_4: 154928868-154935459 Lactuca sativa
Lsat_1_v5_gn_4_93741 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 154933460-154935459 Lactuca sativa
Lsat_1_v5_gn_4_93741 5.0kb upstream 5.0kb upstream 9592   true Lsat_1_v8_lg_4: 154923868-154933459 Lactuca sativa
Lsat_1_v5_gn_4_93741 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 154923868-154928867 Lactuca sativa
Lsat_1_v5_gn_4_93741 5.0kb downstream 5.0kb downstream 9592   true Lsat_1_v8_lg_4: 154928868-154938459 Lactuca sativa
Lsat_1_v5_gn_4_93741 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 154933460-154938459 Lactuca sativa
Lsat_1_v5_gn_4_93741 10.0kb upstream 10.0kb upstream 14592   true Lsat_1_v8_lg_4: 154918868-154933459 Lactuca sativa
Lsat_1_v5_gn_4_93741 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 154918868-154928867 Lactuca sativa
Lsat_1_v5_gn_4_93741 10.0kb downstream 10.0kb downstream 14592   true Lsat_1_v8_lg_4: 154928868-154943459 Lactuca sativa
Lsat_1_v5_gn_4_93741 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 154933460-154943459 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475112 5263 Asterids View MSA
123746183 5271 Pentapetalae View MSA
122795819 5272 Eudicot View MSA
122041907 5273 Angiosperm View MSA
121345404 5274 Embryophyte View MSA
123424391 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain