Gene : Lsat_1_v5_gn_0_39541 L. sativa V8
Defline:  (1 of 3) K01527 - nascent polypeptide-associated complex subunit beta (EGD1, BTF3) Genomic Order:  4319
Name:  ? Lsat_1_v5_gn_0_39541 Secondary Identifier:  ? PAC:38967601
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_39541 0.5kb upstream 0.5kb upstream 2806   true Lsat_1_v8_lg_5: 295520196-295523001 Lactuca sativa
Lsat_1_v5_gn_0_39541 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 295520196-295520695 Lactuca sativa
Lsat_1_v5_gn_0_39541 0.5kb downstream 0.5kb downstream 2806   true Lsat_1_v8_lg_5: 295520696-295523501 Lactuca sativa
Lsat_1_v5_gn_0_39541 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 295523002-295523501 Lactuca sativa
Lsat_1_v5_gn_0_39541 1.0kb upstream 1.0kb upstream 3306   true Lsat_1_v8_lg_5: 295519696-295523001 Lactuca sativa
Lsat_1_v5_gn_0_39541 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 295519696-295520695 Lactuca sativa
Lsat_1_v5_gn_0_39541 1.0kb downstream 1.0kb downstream 3306   true Lsat_1_v8_lg_5: 295520696-295524001 Lactuca sativa
Lsat_1_v5_gn_0_39541 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 295523002-295524001 Lactuca sativa
Lsat_1_v5_gn_0_39541 2.0kb upstream 2.0kb upstream 4306   true Lsat_1_v8_lg_5: 295518696-295523001 Lactuca sativa
Lsat_1_v5_gn_0_39541 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 295518696-295520695 Lactuca sativa
Lsat_1_v5_gn_0_39541 2.0kb downstream 2.0kb downstream 4306   true Lsat_1_v8_lg_5: 295520696-295525001 Lactuca sativa
Lsat_1_v5_gn_0_39541 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 295523002-295525001 Lactuca sativa
Lsat_1_v5_gn_0_39541 5.0kb upstream 5.0kb upstream 7306   true Lsat_1_v8_lg_5: 295515696-295523001 Lactuca sativa
Lsat_1_v5_gn_0_39541 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 295515696-295520695 Lactuca sativa
Lsat_1_v5_gn_0_39541 5.0kb downstream 5.0kb downstream 7306   true Lsat_1_v8_lg_5: 295520696-295528001 Lactuca sativa
Lsat_1_v5_gn_0_39541 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 295523002-295528001 Lactuca sativa
Lsat_1_v5_gn_0_39541 10.0kb upstream 10.0kb upstream 12306   true Lsat_1_v8_lg_5: 295510696-295523001 Lactuca sativa
Lsat_1_v5_gn_0_39541 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 295510696-295520695 Lactuca sativa
Lsat_1_v5_gn_0_39541 10.0kb downstream 10.0kb downstream 12306   true Lsat_1_v8_lg_5: 295520696-295533001 Lactuca sativa
Lsat_1_v5_gn_0_39541 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 295523002-295533001 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472359 5263 Asterids View MSA
123752380 5271 Pentapetalae View MSA
122793181 5272 Eudicot View MSA
122044361 5273 Angiosperm View MSA
121348079 5274 Embryophyte View MSA
123423973 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain