Gene : Lsat_1_v5_gn_5_10060 L. sativa V8
Defline:  (1 of 1) KOG1327 - Copine Genomic Order:  281
Name:  ? Lsat_1_v5_gn_5_10060 Secondary Identifier:  ? PAC:38967924
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_10060 0.5kb upstream 0.5kb upstream 5050   true Lsat_1_v8_lg_5: 18923850-18928899 Lactuca sativa
Lsat_1_v5_gn_5_10060 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 18923850-18924349 Lactuca sativa
Lsat_1_v5_gn_5_10060 0.5kb downstream 0.5kb downstream 5050   true Lsat_1_v8_lg_5: 18924350-18929399 Lactuca sativa
Lsat_1_v5_gn_5_10060 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 18928900-18929399 Lactuca sativa
Lsat_1_v5_gn_5_10060 1.0kb upstream 1.0kb upstream 5550   true Lsat_1_v8_lg_5: 18923350-18928899 Lactuca sativa
Lsat_1_v5_gn_5_10060 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 18923350-18924349 Lactuca sativa
Lsat_1_v5_gn_5_10060 1.0kb downstream 1.0kb downstream 5550   true Lsat_1_v8_lg_5: 18924350-18929899 Lactuca sativa
Lsat_1_v5_gn_5_10060 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 18928900-18929899 Lactuca sativa
Lsat_1_v5_gn_5_10060 2.0kb upstream 2.0kb upstream 6550   true Lsat_1_v8_lg_5: 18922350-18928899 Lactuca sativa
Lsat_1_v5_gn_5_10060 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 18922350-18924349 Lactuca sativa
Lsat_1_v5_gn_5_10060 2.0kb downstream 2.0kb downstream 6550   true Lsat_1_v8_lg_5: 18924350-18930899 Lactuca sativa
Lsat_1_v5_gn_5_10060 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 18928900-18930899 Lactuca sativa
Lsat_1_v5_gn_5_10060 5.0kb upstream 5.0kb upstream 9550   true Lsat_1_v8_lg_5: 18919350-18928899 Lactuca sativa
Lsat_1_v5_gn_5_10060 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 18919350-18924349 Lactuca sativa
Lsat_1_v5_gn_5_10060 5.0kb downstream 5.0kb downstream 9550   true Lsat_1_v8_lg_5: 18924350-18933899 Lactuca sativa
Lsat_1_v5_gn_5_10060 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 18928900-18933899 Lactuca sativa
Lsat_1_v5_gn_5_10060 10.0kb upstream 10.0kb upstream 14550   true Lsat_1_v8_lg_5: 18914350-18928899 Lactuca sativa
Lsat_1_v5_gn_5_10060 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 18914350-18924349 Lactuca sativa
Lsat_1_v5_gn_5_10060 10.0kb downstream 10.0kb downstream 14550   true Lsat_1_v8_lg_5: 18924350-18938899 Lactuca sativa
Lsat_1_v5_gn_5_10060 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 18928900-18938899 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781508 5273 Angiosperm View MSA
122773325 5272 Eudicot View MSA
121454074 5263 Asterids View MSA
123749806 5271 Pentapetalae View MSA
121351001 5274 Embryophyte View MSA
123424570 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain