Gene : Lsat_1_v5_gn_5_100260 L. sativa V8
Defline:  (1 of 1) PTHR33102//PTHR33102:SF12 - FAMILY NOT NAMED // DVL10 Genomic Order:  2619
Name:  ? Lsat_1_v5_gn_5_100260 Secondary Identifier:  ? PAC:38971639
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_100260 0.5kb upstream 0.5kb upstream 900   true Lsat_1_v8_lg_5: 216931193-216932092 Lactuca sativa
Lsat_1_v5_gn_5_100260 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 216931593-216932092 Lactuca sativa
Lsat_1_v5_gn_5_100260 0.5kb downstream 0.5kb downstream 900   true Lsat_1_v8_lg_5: 216930693-216931592 Lactuca sativa
Lsat_1_v5_gn_5_100260 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 216930693-216931192 Lactuca sativa
Lsat_1_v5_gn_5_100260 1.0kb upstream 1.0kb upstream 1400   true Lsat_1_v8_lg_5: 216931193-216932592 Lactuca sativa
Lsat_1_v5_gn_5_100260 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 216931593-216932592 Lactuca sativa
Lsat_1_v5_gn_5_100260 1.0kb downstream 1.0kb downstream 1400   true Lsat_1_v8_lg_5: 216930193-216931592 Lactuca sativa
Lsat_1_v5_gn_5_100260 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 216930193-216931192 Lactuca sativa
Lsat_1_v5_gn_5_100260 2.0kb upstream 2.0kb upstream 2400   true Lsat_1_v8_lg_5: 216931193-216933592 Lactuca sativa
Lsat_1_v5_gn_5_100260 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 216931593-216933592 Lactuca sativa
Lsat_1_v5_gn_5_100260 2.0kb downstream 2.0kb downstream 2400   true Lsat_1_v8_lg_5: 216929193-216931592 Lactuca sativa
Lsat_1_v5_gn_5_100260 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 216929193-216931192 Lactuca sativa
Lsat_1_v5_gn_5_100260 5.0kb upstream 5.0kb upstream 5400   true Lsat_1_v8_lg_5: 216931193-216936592 Lactuca sativa
Lsat_1_v5_gn_5_100260 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 216931593-216936592 Lactuca sativa
Lsat_1_v5_gn_5_100260 5.0kb downstream 5.0kb downstream 5400   true Lsat_1_v8_lg_5: 216926193-216931592 Lactuca sativa
Lsat_1_v5_gn_5_100260 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 216926193-216931192 Lactuca sativa
Lsat_1_v5_gn_5_100260 10.0kb upstream 10.0kb upstream 10400   true Lsat_1_v8_lg_5: 216931193-216941592 Lactuca sativa
Lsat_1_v5_gn_5_100260 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 216931593-216941592 Lactuca sativa
Lsat_1_v5_gn_5_100260 10.0kb downstream 10.0kb downstream 10400   true Lsat_1_v8_lg_5: 216921193-216931592 Lactuca sativa
Lsat_1_v5_gn_5_100260 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 216921193-216931192 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121446153 5263 Asterids Singleton cluster - no MSA
123741879 5271 Pentapetalae View MSA
122796197 5272 Eudicot View MSA
122048565 5273 Angiosperm View MSA
121346075 5274 Embryophyte View MSA
123380321 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain