Gene : Lsat_1_v5_gn_5_103240 L. sativa V8
Defline:  (1 of 1) PTHR23418//PTHR23418:SF4 - ACIREDUCTONE DIOXYGENASE // 1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4 Genomic Order:  2710
Name:  ? Lsat_1_v5_gn_5_103240 Secondary Identifier:  ? PAC:38966320
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-4361 Lactuca sativa pathologic  
Lsativa PWY-7270 Lactuca sativa pathologic  
Lsativa PWY-7528 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_103240 0.5kb upstream 0.5kb upstream 1931   true Lsat_1_v8_lg_5: 221499477-221501407 Lactuca sativa
Lsat_1_v5_gn_5_103240 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 221500908-221501407 Lactuca sativa
Lsat_1_v5_gn_5_103240 0.5kb downstream 0.5kb downstream 1931   true Lsat_1_v8_lg_5: 221498977-221500907 Lactuca sativa
Lsat_1_v5_gn_5_103240 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 221498977-221499476 Lactuca sativa
Lsat_1_v5_gn_5_103240 1.0kb upstream 1.0kb upstream 2431   true Lsat_1_v8_lg_5: 221499477-221501907 Lactuca sativa
Lsat_1_v5_gn_5_103240 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 221500908-221501907 Lactuca sativa
Lsat_1_v5_gn_5_103240 1.0kb downstream 1.0kb downstream 2431   true Lsat_1_v8_lg_5: 221498477-221500907 Lactuca sativa
Lsat_1_v5_gn_5_103240 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 221498477-221499476 Lactuca sativa
Lsat_1_v5_gn_5_103240 2.0kb upstream 2.0kb upstream 3431   true Lsat_1_v8_lg_5: 221499477-221502907 Lactuca sativa
Lsat_1_v5_gn_5_103240 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 221500908-221502907 Lactuca sativa
Lsat_1_v5_gn_5_103240 2.0kb downstream 2.0kb downstream 3431   true Lsat_1_v8_lg_5: 221497477-221500907 Lactuca sativa
Lsat_1_v5_gn_5_103240 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 221497477-221499476 Lactuca sativa
Lsat_1_v5_gn_5_103240 5.0kb upstream 5.0kb upstream 6431   true Lsat_1_v8_lg_5: 221499477-221505907 Lactuca sativa
Lsat_1_v5_gn_5_103240 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 221500908-221505907 Lactuca sativa
Lsat_1_v5_gn_5_103240 5.0kb downstream 5.0kb downstream 6431   true Lsat_1_v8_lg_5: 221494477-221500907 Lactuca sativa
Lsat_1_v5_gn_5_103240 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 221494477-221499476 Lactuca sativa
Lsat_1_v5_gn_5_103240 10.0kb upstream 10.0kb upstream 11431   true Lsat_1_v8_lg_5: 221499477-221510907 Lactuca sativa
Lsat_1_v5_gn_5_103240 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 221500908-221510907 Lactuca sativa
Lsat_1_v5_gn_5_103240 10.0kb downstream 10.0kb downstream 11431   true Lsat_1_v8_lg_5: 221489477-221500907 Lactuca sativa
Lsat_1_v5_gn_5_103240 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 221489477-221499476 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479636 5263 Asterids View MSA
123741202 5271 Pentapetalae View MSA
122793339 5272 Eudicot View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain