Gene : Lsat_1_v5_gn_5_104381 L. sativa V8
Defline:  (1 of 1) PTHR12446//PTHR12446:SF21 - TESMIN/TSO1-RELATED // CRC DOMAIN-CONTAINING PROTEIN TSO1-RELATED Genomic Order:  2712
Name:  ? Lsat_1_v5_gn_5_104381 Secondary Identifier:  ? PAC:38965034
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_104381 0.5kb upstream 0.5kb upstream 5261   true Lsat_1_v8_lg_5: 221612843-221618103 Lactuca sativa
Lsat_1_v5_gn_5_104381 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 221612843-221613342 Lactuca sativa
Lsat_1_v5_gn_5_104381 0.5kb downstream 0.5kb downstream 5261   true Lsat_1_v8_lg_5: 221613343-221618603 Lactuca sativa
Lsat_1_v5_gn_5_104381 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 221618104-221618603 Lactuca sativa
Lsat_1_v5_gn_5_104381 1.0kb upstream 1.0kb upstream 5761   true Lsat_1_v8_lg_5: 221612343-221618103 Lactuca sativa
Lsat_1_v5_gn_5_104381 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 221612343-221613342 Lactuca sativa
Lsat_1_v5_gn_5_104381 1.0kb downstream 1.0kb downstream 5761   true Lsat_1_v8_lg_5: 221613343-221619103 Lactuca sativa
Lsat_1_v5_gn_5_104381 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 221618104-221619103 Lactuca sativa
Lsat_1_v5_gn_5_104381 2.0kb upstream 2.0kb upstream 6761   true Lsat_1_v8_lg_5: 221611343-221618103 Lactuca sativa
Lsat_1_v5_gn_5_104381 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 221611343-221613342 Lactuca sativa
Lsat_1_v5_gn_5_104381 2.0kb downstream 2.0kb downstream 6761   true Lsat_1_v8_lg_5: 221613343-221620103 Lactuca sativa
Lsat_1_v5_gn_5_104381 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 221618104-221620103 Lactuca sativa
Lsat_1_v5_gn_5_104381 5.0kb upstream 5.0kb upstream 9761   true Lsat_1_v8_lg_5: 221608343-221618103 Lactuca sativa
Lsat_1_v5_gn_5_104381 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 221608343-221613342 Lactuca sativa
Lsat_1_v5_gn_5_104381 5.0kb downstream 5.0kb downstream 9761   true Lsat_1_v8_lg_5: 221613343-221623103 Lactuca sativa
Lsat_1_v5_gn_5_104381 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 221618104-221623103 Lactuca sativa
Lsat_1_v5_gn_5_104381 10.0kb upstream 10.0kb upstream 14761   true Lsat_1_v8_lg_5: 221603343-221618103 Lactuca sativa
Lsat_1_v5_gn_5_104381 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 221603343-221613342 Lactuca sativa
Lsat_1_v5_gn_5_104381 10.0kb downstream 10.0kb downstream 14761   true Lsat_1_v8_lg_5: 221613343-221628103 Lactuca sativa
Lsat_1_v5_gn_5_104381 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 221618104-221628103 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467418 5263 Asterids View MSA
123746953 5271 Pentapetalae View MSA
122792977 5272 Eudicot View MSA
122047372 5273 Angiosperm View MSA
121349909 5274 Embryophyte View MSA
123426596 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain